| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3276 |
|---|
| Symbol | |
|---|
| ID | 7861748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3632874 |
|---|
| End bp | 3633698 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 643867376 |
|---|
| Product | pyrroline-5-carboxylate reductase |
|---|
| Protein accession | YP_002883281 |
|---|
| Protein GI | 229821755 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
|---|
| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.215376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00496059 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATCG CACTGCTCGG CGCCGGGACC ATGGGTCGTG CCGTCCTGAC GTCGATCCTG
GCGACCGACG GCGTCGGGGC CGACGACGTC GTCGTCACCA CGTCGCGCGA CGCGTCAGCC
GAGGCCGTCG CGAGCCGGTT CGGCGTCGCC GCCGGAACCG ACAACCGGGC GGCCGCGACG
GACGCCGACG TCGTCGTCCT CGGCGTCAAG CCCCAGGGCA TGGCGGCCCT GCTCGACGAG
ATCGGCCCGG CGATCGGCGG CGAGACGCTC GTCGCGAGCC TCGCCGTCGG GCTCGCCACG
ACGTTCTACG AGGCGCGGCT GCCCGCCGGG ACGCCCGTCG TCCGCGTCAT GCCGAACACG
CCGGCGACGA TCGGGCAGGG CGTCAGCGCG CTCAGCGCGG GAGCGGCGGC GACCGATGCG
CACCTCGCCC TCCTGGAGCG CCTGCTCGCC GGCACCGGGC TCGTGGTGCG GGTGCCGGAG
TCGCAGCAGT CGGTCGTCGC CGCCGTCTCG GGCTCCGGGC CCGCGTACGT CTTCCACCTC
GTCGACGCGC TCGCGGAGGC CGGCACCGCG GGGGGACTCC CGCGGGCGAC GGCGCTGCGC
CTCGCCGCGC AGACCGTCGC CGGCGCCGGG GCCCTCGCCG TGAGCAGCGG GGAGCACCCG
GCCATCCTGC GCGAGCAGGT CTCCTCGCCG GGAGGGACGA CGCTCGCCGC CCTCGCCGAG
CTCGACGACC GCGGCGTGCG CGCCGCCTAC GCCGCGGCCG TGCGGGCCGC CGTCCGACGG
GCCGGCGAGC TCGCCGCCGA CCTCGACCCC GGGCCCCCGC GGTGA
|
|---|
| Protein sequence | MRIALLGAGT MGRAVLTSIL ATDGVGADDV VVTTSRDASA EAVASRFGVA AGTDNRAAAT
DADVVVLGVK PQGMAALLDE IGPAIGGETL VASLAVGLAT TFYEARLPAG TPVVRVMPNT
PATIGQGVSA LSAGAAATDA HLALLERLLA GTGLVVRVPE SQQSVVAAVS GSGPAYVFHL
VDALAEAGTA GGLPRATALR LAAQTVAGAG ALAVSSGEHP AILREQVSSP GGTTLAALAE
LDDRGVRAAY AAAVRAAVRR AGELAADLDP GPPR
|
|---|
| |