Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3275 |
Symbol | |
ID | 7861747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3631840 |
End bp | 3632841 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643867375 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_002883280 |
Protein GI | 229821754 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.183529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00604574 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGACG TCGCGAAGCT CGCCGGCGTC TCCCACCAGA CCGTCTCACG CGTGCTCAAC GACCACCCGA GCGTGCGGCC CGCGACGCGG CAGCGGGTGC TCGACGCCAT GGCGGAGCTC GCGTACACCC CGAATCGGCT GGCGCGCGCG CTCGTGACGC GACGTTCCGG GCTGCTCGGC GTCGTGACCA GCGGGTCGGC GAAGTACGGG CCGATGAGCA CGCTCATCGC CGTCGAGGAG GCGGCGCGGG CGGCCGGCTA CGCCGTGAAC GTCGCGGTGG TGCGCTCGCC GACGCAGGAG TCCATGGGGG CCGTCCTCGC GAGCTTCGAC GAGCAGGCGG TTGAGGGCGT CGTCGTCATC GCACCCCGCG CCACGGCGGT CGAGGCGCTC CGGGCTGTCG ACTCGCGCGC CCCGGTGATC CTCGTCGCGG CGGGCGTGGG GACGGACGAG CGGTTCGCGA CGGTGAGCGT CGACCAGGCG CGCGGTGCGC GGCTCGCCGT CGAGCACCTC GTGTCGCTCG GGCACCGCAC GGTCGCCCAC GTGTCCGGCC CGGACGACTG GTTCGACGCG CGCGAGCGTC TCGCCGGGTG GCGGTCCGCG CTCGCGGAGG CCGGTCTCGA GGGCGAGCTC GTGGAGGGCG ACTGGACGGC CGACGTCGGC TACACCGCCG GGCGGCAGCT CGTGGCCGAC GGCGTCCCGG GCGCGATCTT CGCCGCGAAC GACCAGCTCG CCCTGGGGCT CCTGCGCGCG TTCGCCGAGG CCGGGGTGGC GGTGCCGGGC GACGTGAGCG TCGTCGGCTT CGACGACATC GAGGGGACCG CCCACTTCTT CCCGCCGCTC ACGACCGTGC GGCAGGACTT CACCCGACTC GGCGAGGTGT GCCTCGAGGT GCTGCTGGCG GCGATCGCCG CGGGGTCGAC GACGGCGTCC GCCGCTCCCG AGCCCGTCGC GCCCGAGCTG GTGGTCAGGT CGAGCACCGG GCCGCCGTCT GCCTCGAGCT GA
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Protein sequence | MADVAKLAGV SHQTVSRVLN DHPSVRPATR QRVLDAMAEL AYTPNRLARA LVTRRSGLLG VVTSGSAKYG PMSTLIAVEE AARAAGYAVN VAVVRSPTQE SMGAVLASFD EQAVEGVVVI APRATAVEAL RAVDSRAPVI LVAAGVGTDE RFATVSVDQA RGARLAVEHL VSLGHRTVAH VSGPDDWFDA RERLAGWRSA LAEAGLEGEL VEGDWTADVG YTAGRQLVAD GVPGAIFAAN DQLALGLLRA FAEAGVAVPG DVSVVGFDDI EGTAHFFPPL TTVRQDFTRL GEVCLEVLLA AIAAGSTTAS AAPEPVAPEL VVRSSTGPPS ASS
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