Gene Bcav_3275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3275 
Symbol 
ID7861747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3631840 
End bp3632841 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content75% 
IMG OID643867375 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002883280 
Protein GI229821754 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.183529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00604574 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGACG TCGCGAAGCT CGCCGGCGTC TCCCACCAGA CCGTCTCACG CGTGCTCAAC 
GACCACCCGA GCGTGCGGCC CGCGACGCGG CAGCGGGTGC TCGACGCCAT GGCGGAGCTC
GCGTACACCC CGAATCGGCT GGCGCGCGCG CTCGTGACGC GACGTTCCGG GCTGCTCGGC
GTCGTGACCA GCGGGTCGGC GAAGTACGGG CCGATGAGCA CGCTCATCGC CGTCGAGGAG
GCGGCGCGGG CGGCCGGCTA CGCCGTGAAC GTCGCGGTGG TGCGCTCGCC GACGCAGGAG
TCCATGGGGG CCGTCCTCGC GAGCTTCGAC GAGCAGGCGG TTGAGGGCGT CGTCGTCATC
GCACCCCGCG CCACGGCGGT CGAGGCGCTC CGGGCTGTCG ACTCGCGCGC CCCGGTGATC
CTCGTCGCGG CGGGCGTGGG GACGGACGAG CGGTTCGCGA CGGTGAGCGT CGACCAGGCG
CGCGGTGCGC GGCTCGCCGT CGAGCACCTC GTGTCGCTCG GGCACCGCAC GGTCGCCCAC
GTGTCCGGCC CGGACGACTG GTTCGACGCG CGCGAGCGTC TCGCCGGGTG GCGGTCCGCG
CTCGCGGAGG CCGGTCTCGA GGGCGAGCTC GTGGAGGGCG ACTGGACGGC CGACGTCGGC
TACACCGCCG GGCGGCAGCT CGTGGCCGAC GGCGTCCCGG GCGCGATCTT CGCCGCGAAC
GACCAGCTCG CCCTGGGGCT CCTGCGCGCG TTCGCCGAGG CCGGGGTGGC GGTGCCGGGC
GACGTGAGCG TCGTCGGCTT CGACGACATC GAGGGGACCG CCCACTTCTT CCCGCCGCTC
ACGACCGTGC GGCAGGACTT CACCCGACTC GGCGAGGTGT GCCTCGAGGT GCTGCTGGCG
GCGATCGCCG CGGGGTCGAC GACGGCGTCC GCCGCTCCCG AGCCCGTCGC GCCCGAGCTG
GTGGTCAGGT CGAGCACCGG GCCGCCGTCT GCCTCGAGCT GA
 
Protein sequence
MADVAKLAGV SHQTVSRVLN DHPSVRPATR QRVLDAMAEL AYTPNRLARA LVTRRSGLLG 
VVTSGSAKYG PMSTLIAVEE AARAAGYAVN VAVVRSPTQE SMGAVLASFD EQAVEGVVVI
APRATAVEAL RAVDSRAPVI LVAAGVGTDE RFATVSVDQA RGARLAVEHL VSLGHRTVAH
VSGPDDWFDA RERLAGWRSA LAEAGLEGEL VEGDWTADVG YTAGRQLVAD GVPGAIFAAN
DQLALGLLRA FAEAGVAVPG DVSVVGFDDI EGTAHFFPPL TTVRQDFTRL GEVCLEVLLA
AIAAGSTTAS AAPEPVAPEL VVRSSTGPPS ASS