Gene Bcav_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3272 
Symbol 
ID7861744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3627300 
End bp3628847 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content72% 
IMG OID643867372 
ProductL-arabinose isomerase 
Protein accessionYP_002883277 
Protein GI229821751 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2160] L-arabinose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0251873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGT CACCCGCGGT GCCCGCCACC GACCCGACCG CCCAGGACCC GTTCGCCGGT 
CGTGAGATCT GGTTCCTCAC CGGCAGCCAG CACCTGTACG GGCCGGAGGT GCTCGAGCAG
GTGGCCTCCC AGTCGGGATC GATCATTGCG ACGCTCGACG ACGCCGCCGA GATCCCGGTG
CGGATCGTCG CCAAGCCGGT GCTCACGGAC ACCGAGGCGA TCCGGCGCAT CGCGGACGAG
GCGAACGCGG ACCCGGCGTG CGTCGGCGTC ATCGCGTGGA TGCACACGTT CTCCCCGGCG
AAGATGTGGA TCACCGGGCT GGACGCGCTG CGGACGCCGC TGCTGCACCT GCACACGCAG
GCGAACGTCG GCCTCCCGTG GGCCGACATC GACATGGACT TCATGAACCT CAACCAGGCC
GCGCACGGGG ACCGCGAGTT CGCGTACGTC GCGACGCGGC TCGGCGTGGC CCGCAAGACG
GTGGTCGGGC ACGCGTCCGA CGCGCGGGTG CGCAGCGAGG TCGGCACGTG GGCGCGGGCG
GCGACGGCGT GGGCGCACGT GCGCGGGCTC AAGCTCGCCC GGTTCGGCGA CAACATGCGG
TTCGTCGCCG TCACCGAGGG TGACAAGACG GAGGCGGAGC GGGTCTTCGG CGTCCAGGTC
AACACGTGGG GCGTGAACGA CCTGGTGGAG CGGGTCGACG CCGCACCCGA GGGCATCGTC
AACGCGCTCG CCGCCGAGTA CGAGCTGGCC TACGACGTCG CCCCCGAGCT GCGCCGCGGC
GGCGAGCGGC ACGAGTCCCT GCGCTACGCC GCCCGCATCG AGGCCGGCCT GCGCACGTTC
CTCGCGGAGG GTGGGTTCGG CGCGTTCACC ACGAACTTCG AGGACCTCGG CGGGCTGCGG
CAGCTCCCGG GGCTCGCCGT GCAGCGCCTC ATGGCGGACG GCTACGGCTT CGGCGCCGAG
GGCGACTGGA AGACGGCGGT GCTCGTGCGC GCCGCGAAGG TCATGGGCCA CGGGCTGCCC
GGCGGCGCCT CCCTCATGGA GGACTACACG TACCACCTGA CGCCGGGGGA GGAGAAGATC
CTCGGCGCCC ACATGCTCGA GATCTGCCCG TCGCTGACGA CGGCGAAGCC GCGCGTCGAG
ATCCACCCGC TCGGCATCGG CGGGCGCGAG GACCCGGTGC GCCTCGTGTT CGACACCGAC
CCCGGCCCGG GCATCGTCGT CTCGCTCGCC GACCTGCGCG AGCGCTTTCG TCTTGTGGCG
AACGTCGTCG ACGTCGTCGG CCCGGACGCC CCGCTGCCGA ACCTTCCCGT GGCCTCGGCC
GTGTGGGTCC CGGAGCCGGA CTTCGCGACG TCGGCCCAGG CGTGGCTGAC GGCCGGCGGG
GCGCACCACA CCGTGCTCAC CACGGCGGTC GGCGCCGAGG CGTGGGAGGA CTTCGCCGAG
ATCGCCCGCA CCGAGCTCGT GCTCATCGAC CGAGACACGC GGCTGCGCGA GCTGCGCAAG
GAACTACGGT GGAACGCCGC CTACTACCGC CTCGCCCAAG GGATGTGA
 
Protein sequence
MTASPAVPAT DPTAQDPFAG REIWFLTGSQ HLYGPEVLEQ VASQSGSIIA TLDDAAEIPV 
RIVAKPVLTD TEAIRRIADE ANADPACVGV IAWMHTFSPA KMWITGLDAL RTPLLHLHTQ
ANVGLPWADI DMDFMNLNQA AHGDREFAYV ATRLGVARKT VVGHASDARV RSEVGTWARA
ATAWAHVRGL KLARFGDNMR FVAVTEGDKT EAERVFGVQV NTWGVNDLVE RVDAAPEGIV
NALAAEYELA YDVAPELRRG GERHESLRYA ARIEAGLRTF LAEGGFGAFT TNFEDLGGLR
QLPGLAVQRL MADGYGFGAE GDWKTAVLVR AAKVMGHGLP GGASLMEDYT YHLTPGEEKI
LGAHMLEICP SLTTAKPRVE IHPLGIGGRE DPVRLVFDTD PGPGIVVSLA DLRERFRLVA
NVVDVVGPDA PLPNLPVASA VWVPEPDFAT SAQAWLTAGG AHHTVLTTAV GAEAWEDFAE
IARTELVLID RDTRLRELRK ELRWNAAYYR LAQGM