| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3266 |
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| Symbol | |
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| ID | 7861738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3620943 |
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| End bp | 3621956 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643867366 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_002883271 |
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| Protein GI | 229821745 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0791404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGACG TTTCCTCGGC CACCGACGAC CTCGCGCTCG CGCGCGCCGG GGACGACGAC
GCCTTCACCC GCCTCGTCGC GCCGCTGCGA CGGGAGCTGC ACGCGCACTG CTACCGGATG
CTCGGGTCCG CGCACGACGC CGACGACGCG CTCCAGGAGG GCATGGTGCG GGCGTGGCGC
CACCTGTCGC GGTTCGAGGG TCGCAGCTCG TTGCGGTCGT GGCTGTACTC GGTGACGACG
CGCACGTGCC TGGACGCCGT GGCCGGGCGC CGTCGTCGCG CGCTGCCGAT GGACCTCGGG
CCGGCGAGCG ACCACACGGT GCTCGACGAC GTCCCGCGCG ACGACGTCCC ATGGCTCACG
CCGTATCCGG ACGTGACCGG GAGCCGGGAA CCGGCTGCCC GGTACGAGCA GCGGGAGGCC
GTCGAGCTCG CGTTCGTCGC CGCGTGCCAG CACCTGCCCG GCAACCAGCG GGCGGCGCTG
CTGCTGTTCG ACGTGCTGGG CTTCTCCGCT GCCGAGATCG CCGAGCTGAT GGACACGACG
ACGGCGTCCG TCACCAGCGC GCTCCAGCGT GCGCGCCGCA CGGTGGCGGA TCGCGTGCCG
CCGCGTTCGC AGGCGCAGGT GCTGCGCACC ATCGACGACG CCGAGCTCCG CGCCGTCGTC
ACCGACTACG CCGGTGCGTT CGAGCGCGGC GACACGGCGG CGCTCGCGGC GCTCCTCACC
GAGGACGTCA CGTGGTCGAT GCCGCCGCTG CCGCACTGGT ACTCCGGGCG CGATCGCGTG
CTGGACTTCG CCCGACGCGT GCCGATGACG CGGTGCGGGT TCTGGCGACA CCGGGTGACG
CGTGCCAACG GGCAGCCGGC CGTGGCGTCG TACCTGAGCC GCGACGACGC CGACGGCCCG
CACGACGCCT GGTCGATCAA CGTCCTCACG CTGAGCGGCG ACCGGATCGC CGGCATCACG
TCGTTCATCG GCGTCGAGCA CTTCGCGTCG CTGGGGCTGC CGGCCGCGCT CTGA
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| Protein sequence | MTDVSSATDD LALARAGDDD AFTRLVAPLR RELHAHCYRM LGSAHDADDA LQEGMVRAWR
HLSRFEGRSS LRSWLYSVTT RTCLDAVAGR RRRALPMDLG PASDHTVLDD VPRDDVPWLT
PYPDVTGSRE PAARYEQREA VELAFVAACQ HLPGNQRAAL LLFDVLGFSA AEIAELMDTT
TASVTSALQR ARRTVADRVP PRSQAQVLRT IDDAELRAVV TDYAGAFERG DTAALAALLT
EDVTWSMPPL PHWYSGRDRV LDFARRVPMT RCGFWRHRVT RANGQPAVAS YLSRDDADGP
HDAWSINVLT LSGDRIAGIT SFIGVEHFAS LGLPAAL
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