| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3261 |
|---|
| Symbol | |
|---|
| ID | 7861733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3616957 |
|---|
| End bp | 3618462 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643867361 |
|---|
| Product | Alpha-N-arabinofuranosidase |
|---|
| Protein accession | YP_002883266 |
|---|
| Protein GI | 229821740 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.232195 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGCGCG GAACCCTCAC GATCGACCCG GCGTTCGCCG TCGGCCCCGT CCGCCCCCGC
ACGTTCGGCT CGTTCGTCGA GCACCTCGGA CGTTGCGTGT ACACCGGCAT CTACGAGCCG
GAGCACCCGG ACGCGGATGC GGACGGCTTC CGCAGCGACG TCCTCGACCT CACGCGTGAG
CTCGGCGTCT CGACGGTGCG CTACCCCGGC GGCAACTTCG TGTCCGGGTA CCGCTGGGAG
GACGGCGTCG GCCCGCGCGA GAAGCGGCCC GTCCGGCTCG ACCTTGCCTG GCACTCGAGC
GACCCGAACT GGGTCGGCAT CGACGAGTTC ATGGCGTGGT GCGCCAAGGC CGACGTCGAG
CCGATGATGG CGATCAACCT CGGCACGCGC GGCGTGCAGG AGGCGCTCGA CGTCCTCGAG
TACTGCAACG CGCCGGTCGG CACGCACTTC GCCGACCTGC GCGCCGCGAA CGGCCACCCC
GAGCCGTACC GCATCAAGAT GTGGTGCCTG GGCAACGAGA TGGACGGCCC GTGGCAGATC
GGCCACAAGA CGGCCGAGGA GTACGCCCGC GTCGCCACCG AGGCCGCCCG CGCGATGCGG
ATGATCGACC CGGAGCTCGA GCTCGTCGTC TGCGGCTCGT CGAGCTCGTC GATGCCGACG
TTCGGCGCCT GGGAGCACAC CGTGCTGGCC GAGTCGTACG AGCACGTCGA CCTCGTGTCG
GCGCACGCGT ACTACTACGA GGTCGACGGC GACCTCGGCT CGTTCCTCGC CTCCGCCGTC
GACATGGACC ACTTCATCGA CTCCGTCGCG GCGACGGCGG ACGCCGTGCG GGCGGCCGGC
AAGCACACGA AGCGGATCCA CATCAGCTTC GACGAGTGGA ACGTCTGGTA CCAGAAGCGC
GCCGAGTCAC GCCCGCCGTC GGGCGACGAC TGGCCCGTGG CGCCGGTGCT GCTCGAGGAC
ACCTACAACG TGGCCGACGC CGTCGTCGTC GGGAACCTGC TCGTGTCGCT GCTGCGGCAC
ACCGACCGGG TCCACGCCGC GAGCCTCGCC CAGCTCGTCA ACGTCATCGC GCCGATCATG
ACGGAGCCCG GCGGCCGCTC GTGGCGGCAG ACGATCTTCC ACCCGTTCGC GCTGACCGCA
CAGCACGCGA AGGGCCAGGT GCTGCAGGTC GCGCTGGACG CCCCGACGTA CTCCACGTCG
CGCTTCGGCG AGGTCAGCGT GCTCGACGCC GTCGCGACGC ACGACGCCGA GTCCGGCGCC
GTCACGCTGT TCGTCGTCAA CCGCTCGACC GACGCGCCGC TGACGCTCGA CGTCGACCTG
CGCGGCGTCG GAGACGTGTC GGTCCTCGAG GCGCTCACGC TGGCGAACCC CGACCACACG
TGGGCTGCGA CCGCCGACGA CGCCGACTCC GTCCTCCCGC AGGCGAACGG CAGCGCGGCG
ATCGCCGAGG GCCGCCTGAG CGTGGAGCTC CCGCCCGTGT CGTGGAGCGT CGTCCGCCTC
GGCTGA
|
|---|
| Protein sequence | MLRGTLTIDP AFAVGPVRPR TFGSFVEHLG RCVYTGIYEP EHPDADADGF RSDVLDLTRE
LGVSTVRYPG GNFVSGYRWE DGVGPREKRP VRLDLAWHSS DPNWVGIDEF MAWCAKADVE
PMMAINLGTR GVQEALDVLE YCNAPVGTHF ADLRAANGHP EPYRIKMWCL GNEMDGPWQI
GHKTAEEYAR VATEAARAMR MIDPELELVV CGSSSSSMPT FGAWEHTVLA ESYEHVDLVS
AHAYYYEVDG DLGSFLASAV DMDHFIDSVA ATADAVRAAG KHTKRIHISF DEWNVWYQKR
AESRPPSGDD WPVAPVLLED TYNVADAVVV GNLLVSLLRH TDRVHAASLA QLVNVIAPIM
TEPGGRSWRQ TIFHPFALTA QHAKGQVLQV ALDAPTYSTS RFGEVSVLDA VATHDAESGA
VTLFVVNRST DAPLTLDVDL RGVGDVSVLE ALTLANPDHT WAATADDADS VLPQANGSAA
IAEGRLSVEL PPVSWSVVRL G
|
|---|
| |