Gene Bcav_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3236 
Symbol 
ID7861708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3594756 
End bp3595709 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content79% 
IMG OID643867337 
ProductO-succinylbenzoate synthase 
Protein accessionYP_002883242 
Protein GI229821716 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.181885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0542752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGACG TGCCAGCGGA CCTGCTCGTC TACTCGACCC CGCTGCGGCA GCGGTTCCGC 
GGCATCGACG TGCGCGACGG CGTCCTGCTG CGCGGCGACG CCGGGTGGGG CGAGTTCTCC
CCGTTCTGGG ACTACGACGC CGACACCTCG CGGCCGTGGC TCGCGGCGGC GCGCGAGGCG
GCGGACGTCG GGTGGCCCAC GCCGCTGCGC GACCGGGTCC CGGTGAACGT CACGATCCCC
GCCGTCGGGC CGGACGACGC CGCGCGCCTG GTCCGCGAGT CCGGGGGCTG CCGGACGGCG
AAGGTCAAGG TCGCGGAGCC GGGGCAGGAC GTGGCGCAGG AGCAGGCGCG GCTCGAGGCC
GTGCGGGACG CCCTGGGCCC CGAGGGCGCC GTGCGGATCG ACGCCAACGC CGCGTGGGAC
CTCGGCACCG CCCTGGACCG GCTCCCGCTC CTCGACCGCG CCGCGGGGGG CCTCGAGTAC
GCCGAGCAGC CCTGTGCCGC CGTCGCCGAC CTCGCCGCGC TGCGCCGTCG TCAGCACGTG
CCGATCGCCG CCGACGAGTC GATCCGGCGG GCCGCGGACC CGATGGCCGT GCGCCGGGCG
GACGCGGCGG ACGTCGTCGT CCTCAAGGTG CAGCCCCTCG GTGGCGTGCG GGCGTGCCTG
CGGCTGGCCG AGGAGGTGGG GCTGCCGGTC GTGGTGTCGT CGGCGCTCGA GTCCTCCGTG
GGGATCGCCG CCGGCGTCGC GCTCGCCGCC GCGCTGCCGG AGCTGCCCTA CGCGTGCGGT
CTGGCCACCG TCCACCTGTT CGAGCGGGAC GCCGTCGCCG ACCCGCTCCT GCCGACGGAC
GGTGCGCTGG ACGTCCGGCG CGTCGTGCCG CGGGCGGCGT CGAGCGCCGG CCTCGGGGCC
GACGACGCCA CGGCGCGGCG GTGGCGGGCG CGACTCGCGG AGGTGGCCGG GTGA
 
Protein sequence
MTDVPADLLV YSTPLRQRFR GIDVRDGVLL RGDAGWGEFS PFWDYDADTS RPWLAAAREA 
ADVGWPTPLR DRVPVNVTIP AVGPDDAARL VRESGGCRTA KVKVAEPGQD VAQEQARLEA
VRDALGPEGA VRIDANAAWD LGTALDRLPL LDRAAGGLEY AEQPCAAVAD LAALRRRQHV
PIAADESIRR AADPMAVRRA DAADVVVLKV QPLGGVRACL RLAEEVGLPV VVSSALESSV
GIAAGVALAA ALPELPYACG LATVHLFERD AVADPLLPTD GALDVRRVVP RAASSAGLGA
DDATARRWRA RLAEVAG