| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3224 |
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| Symbol | |
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| ID | 7857981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3581823 |
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| End bp | 3583142 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643867325 |
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| Product | NADH-quinone oxidoreductase, F subunit |
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| Protein accession | YP_002883230 |
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| Protein GI | 229821704 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00762011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCGACG CCCCGACGAC GCAGCCGAGC CGGCCGGGCA TGCCCACGCT CACCCCGGTC
CTGTCGGACA TCTGGGACGC CCCCAGGTCC TGGACGCTCG AGGCCTACCG CGAGCGCGGC
GGATACCGCG CGCTCGAGGA GGCGCGCTCG CGCAAGCCCG AGGAGATCGT CGACGCCGTC
AAGGCGTCCG GCCTGCGTGG CCGCGGCGGT GCCGGGTTCC CGACCGGTCT CAAGTGGAGC
TTCCTGCCGC CGCCCGACGG CGGGCCGCGC TACCTGGTCG TGAACGCCGA CGAGTCCGAG
CCGGGCACGT GCAAGGACAT CCCGCTCATG CTCGCGAACC CGCACGCGCT CATCGAGGGC
TCGGCGATCA CGTCGTACGC GATCGGCTGC GACCACGCGT TCATCTACCT GCGCGGCGAG
GTCGTGCACG TGTACCGGCG GCTGCTCGCA GCGGTGCGCG AGGCGGAGGC CGCCGGCCTG
CTGGGCGGCC TGCGGATCAC CGTCCACGCC GGAGCCGGCG CGTACATCTG CGGTGAGGAG
ACGGCGCTGC TCGACTCCCT CGAGGGCCTC CGGGGGCAGC CTCGCCTCAA GCCGCCGTTC
CCCGCCGTCG CGGGTCTCTA CGCGCGGCCG ACCGTCGTCA ACAACGTGGA GTCGATCGCC
AGCGTCCCGT CCATCGTGCT CGGCGGGCCG GAGTGGTTCA CGTCGATGGG CACCGAGAAG
TCGGCGGGCT TCGGCCTGTT CTCGCTGTCG GGGCACGTGA CGCGGCCGGG CCAGTACGAG
GCCCCGCTCG GCATCACGCT GCGTGAGCTC CTGGACCTCG CCGGCGGCGT CCGCGACGGC
CACGAGCTGA AGTTCTGGAC GCCGGGCGGC TCCTCGACGC CGATCCTCAC CGACGAGCAC
CTCGACGTCC CGCTCGACTA CGAGTCGGTG GCCGGCGCCG GGTCGATGCT CGCCACGCGG
GCGCTGCAGA TCTTCGACGA GACGACGTCG GTGGTGCGCG CCGTCGCGCG GTGGACCGAC
TTCTACGCGC ACGAGTCCTG CGGCAAGTGC ACCCCGTGCC GCGAGGGCAC GTACTGGCTC
AAGCAGATCC TGCACCGGCT CGAGGAGGGC CGCGGCACGG CCGAGGACCT CGACACGCTC
GACGAGATCA CGGCGAACAT CGCGGGCCGC AGCTTCTGCG CGTTCGGCGA CGCCGCCGTC
ACGCCGATCC AGAGCGGCAT GAAGTACTTC CGCTCGGAGT TCGAGGCCGG CACCCACACG
CCTGCGCGGG AGCTCTTCCC GTACACGGCG TCGACAGTCT TCTCCGGAGT GAGCTCATGA
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| Protein sequence | MADAPTTQPS RPGMPTLTPV LSDIWDAPRS WTLEAYRERG GYRALEEARS RKPEEIVDAV
KASGLRGRGG AGFPTGLKWS FLPPPDGGPR YLVVNADESE PGTCKDIPLM LANPHALIEG
SAITSYAIGC DHAFIYLRGE VVHVYRRLLA AVREAEAAGL LGGLRITVHA GAGAYICGEE
TALLDSLEGL RGQPRLKPPF PAVAGLYARP TVVNNVESIA SVPSIVLGGP EWFTSMGTEK
SAGFGLFSLS GHVTRPGQYE APLGITLREL LDLAGGVRDG HELKFWTPGG SSTPILTDEH
LDVPLDYESV AGAGSMLATR ALQIFDETTS VVRAVARWTD FYAHESCGKC TPCREGTYWL
KQILHRLEEG RGTAEDLDTL DEITANIAGR SFCAFGDAAV TPIQSGMKYF RSEFEAGTHT
PARELFPYTA STVFSGVSS
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