Gene Bcav_3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3221 
Symbol 
ID7857978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3577285 
End bp3578049 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content74% 
IMG OID643867322 
ProductNADH-quinone oxidoreductase, chain I 
Protein accessionYP_002883227 
Protein GI229821701 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.129277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC CGAAGAAGCG GCCGGCGACC GGCCGCCCGC AGCCGAAGGG CGCTGCGCCG 
GCCCGGCGTC GTCCCGCAGC GCCGCCCGCG AAGCGCCAGG CGCCCGCGCG ACCCGAGCCG
GAGTCCGGCG AGAAGGGCGG GCTCGGGGAG CTCCTGGCGC CCGTCGCCGG GTTCGGCGTC
ACGTTCTCGT CGATGTTCCG GCCGTCGATG ACGGAGCAGT ACCCGTTCGA GAAGAAGCCG
ACCCAGCCGC GCTACCACGG GCGGCACCAG CTGAACCGGT ACGCCGACGG GCTCGAGAAG
TGCATCGGGT GCGAGCTGTG CGCGTGGGCC TGCCCGGCCG ACGCGATCTA CGTGGAGGGC
GCCGACAACT CGCCCGACGC CCAGTTCTCC CCGGGCGAGC GGTACGGCCG CGTCTACCAG
ATCAACTACC TGCGGTGCAT CTTCTGCGGG CTGTGCATCG AGGCGTGCCC GACCCGGGCC
CTGACGATGA CGAACGACTT CGAGCTCGCC GGCCCGACGC GCGAGGGGCT CATCTTCACG
AAGGACGAGC TGCTCGCGCC GCTGCGGGAG GGCCAGCTCG CCGCGCCGCA CCCGATGGTC
GCCGGCACGG TGGACGACGA CTACTACCGC GGTGAGGTCA CCGGCCCCAC CACCGACCAG
GTCGACTGGG TCGCCGAGCA GCGCCCCGAC GACCCGACGT TGCCCGCCGC CCGAGCGGCC
GCGGACGCCG AGGCCACCGC CGAACGCGCG AAGGCCGCCC GGTGA
 
Protein sequence
MAEPKKRPAT GRPQPKGAAP ARRRPAAPPA KRQAPARPEP ESGEKGGLGE LLAPVAGFGV 
TFSSMFRPSM TEQYPFEKKP TQPRYHGRHQ LNRYADGLEK CIGCELCAWA CPADAIYVEG
ADNSPDAQFS PGERYGRVYQ INYLRCIFCG LCIEACPTRA LTMTNDFELA GPTREGLIFT
KDELLAPLRE GQLAAPHPMV AGTVDDDYYR GEVTGPTTDQ VDWVAEQRPD DPTLPAARAA
ADAEATAERA KAAR