Gene Bcav_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3204 
Symbol 
ID7857961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3556501 
End bp3557853 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content77% 
IMG OID643867305 
Productprotein of unknown function DUF571 
Protein accessionYP_002883210 
Protein GI229821684 
COG category 
COG ID 
TIGRFAM ID[TIGR02958] secretion protein snm4 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.245155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC TCCAGCCGCC GCCCACCATG GCGGGGCAGC TGGTCCGTGT CACGATCGCG 
GCGGGCGACC GGCGTCTGGA CGTCGGAGCC CCCGGCGCGA TCCCGGTCGC GGAGCTCGTG
CCCGGGCTTG CCCGCGGGCT CGGGCTCCTC GATCCGGAGA CGGTCTACGG CGGGTACGGG
CTGGTCCGGG CGGACGGCGT CGTCCTCGAC CCCGACCGCA GCCTGCAGGC CCAGGGCGTC
GAGGACGGCG CGGTGCTGAG CATCGAGTCC GGGCTCGACC AGGCGGAGCA GCGCACCTAC
GACGACGTCG TCGAGGCCGT CGCCGACGCG GTCGAGTCGG AGCACCAGGC GTGGACGTCC
GGCGACGCCG CCCGGACGGC GGTGTTCGCC TCCGCGGCGC TGCTCGTGAC GGGCGCGGTG
CTGGTCGTGG CCGCCGGGCT GGCCGCCGTC ACGGCGGCGG CGGTGTGCGG CGTCGTGGCC
GCGGTGCTGC TGGTCGCCGC GTCGGTCGTC GGCCGGACCG GGGCGCCGAG CTCCGCGCCG
GGCACGCTGG GGGTGGTCGC GAGCCTGTAC GGCGCACTGG CCGGGTACCT GGGCGCGGGT
GGCGGTGCGC CGACCGGCTG GCCGCTCGCC TGGGCCGGAG CGGGGGCCGT CGTGGCGGCG
GGCTGCGGGC TGCTGGCCCT GCCCCGCGAG CGGGAGGTCA TGGCCGGCCC GCTGCTCGTC
GGGCTCGGCG CGTTCGGCAT CGGGCTCGCG ACCGGACTGC TCGGGGCCGA CGCCGTCGGG
TCAGCGGCGG CGATCGGCGT CGCCGTCGTC ACGCTCGGGT TCGTGGGCGT GCCGTGGCTC
GCCCTCGCCT CGACGCCGCT GCGCGTGCTC TCGCCCCGCG ACGACGCCGA GATCCTCGCC
GTCCCGCCGC CCGTCGAGCC GGACGACGTG CGTTCCCAGT ACCGCGGGGG CCACCGCCTG
CAGATCGCTC TGCGGACCGG GGCCGGCGTG CTGCTGCTGG CGCTGACGCC GTGGGCCGTC
GGCACCGGGG TGTTCGGCGT CGTCCTGGCG TGTCTCGCGT TCTCCAGCGT GCTGCTCAGC
GTCCGCGAGA CGTACTCGCG CCAGGACGTC GTCATCGTGA TGACGACAGG CATCGTCGGG
GTCGTCGTCA CGGGCATCTC CGCCGCCGCA CTGTTCCCGG AGTGGCGCTC CGCGCTCGCC
GTCGCCGTCG CGGCGCTCGC GGCGATCGTC GTGGCGCTCG GGCTCGTCGC GCCCGGCCGG
CACCTGCGCC TGGCGCGCCT CGCCGACACC GCGGAGCTGC TGTTGCTGGC GCTCGTGCTG
CCGGCTGCCG TCGTCGCTGC CGGGCTGCTG TAG
 
Protein sequence
MTDLQPPPTM AGQLVRVTIA AGDRRLDVGA PGAIPVAELV PGLARGLGLL DPETVYGGYG 
LVRADGVVLD PDRSLQAQGV EDGAVLSIES GLDQAEQRTY DDVVEAVADA VESEHQAWTS
GDAARTAVFA SAALLVTGAV LVVAAGLAAV TAAAVCGVVA AVLLVAASVV GRTGAPSSAP
GTLGVVASLY GALAGYLGAG GGAPTGWPLA WAGAGAVVAA GCGLLALPRE REVMAGPLLV
GLGAFGIGLA TGLLGADAVG SAAAIGVAVV TLGFVGVPWL ALASTPLRVL SPRDDAEILA
VPPPVEPDDV RSQYRGGHRL QIALRTGAGV LLLALTPWAV GTGVFGVVLA CLAFSSVLLS
VRETYSRQDV VIVMTTGIVG VVVTGISAAA LFPEWRSALA VAVAALAAIV VALGLVAPGR
HLRLARLADT AELLLLALVL PAAVVAAGLL