Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3187 |
Symbol | |
ID | 7857943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3541520 |
End bp | 3542389 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643867287 |
Product | type I phosphodiesterase/nucleotide pyrophosphatase |
Protein accession | YP_002883193 |
Protein GI | 229821667 |
COG category | [R] General function prediction only |
COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.280318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0143084 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGTCAGC ACGTGCTGGT GCTCGCCCTC GACGGCGTCC ACGCCGGCAT CCTCGCGACG TGCGCCACCC CGCACCTCGA CGGCGTCGCG GCCCGCGGGT TCGCGCGCGA CATCCGCATC CGCGAGGGCG AGCCGACGAT CAGCGGGCCC ATCTGGACCT CGGCCATGAC CGGCGTGCCC TCGGCGACCC ACGGCGTCCG GGACAACGAC CTCAGCCGGT ACACGCGCCG CGAGCACCCG GACGTCGCCA CGATCCTCGG CGACGCCGAC CCGGGGCTGC GCACCCTCGT CGCCGCGCAC TGGGCACCTC TGGTGACGGG GGCCTCCGGT GGGCCGTTGT TCGCCACCGG CGGGTACTGG CCCGGCGACG TGGGCGGGGT CGACGCGGCC GACGAGCGCG TCACCAGGCA CGCCTGCGAC CGGCTCGCCG CCGAGGACGT GGCGTTCGCG TTCGTGTACT TCCACCTCGT CGACGCCGTC GGGCACGACG TCGGTACCGG CGAGCCCTAC CGTGCGGCGA TCGAGACCAC CGACGCCCGG GTCGGGCGGG TGCTCGACGC CGTCGCGTCG AGGCCCTCGC GGGGGCGCGA GGAGTGGACG GTGATCGCGC TGACGGACCA CGGCCACCGC CCCGAGGGCG GACACGGCGG GCGGAGCGAC GACGAGCGGG CCGCATGGAT CCGTGCGTGC GGGCCGGGAC TCCGCGAGGC CGCCGTCCGG CGGGACCTCA CCCACGAGGA CGTGGCGGCC CAGGCGCTCG TGACCCTGGG CCTGCCGCTC CCGGATCAGA TCACCGGACG CGCACTCACC GCGTGCCCGA CCCAGCGGGC CGCCGCGACG CGGCCCACCA CGCAGGAGGA CGCCACATGA
|
Protein sequence | MRQHVLVLAL DGVHAGILAT CATPHLDGVA ARGFARDIRI REGEPTISGP IWTSAMTGVP SATHGVRDND LSRYTRREHP DVATILGDAD PGLRTLVAAH WAPLVTGASG GPLFATGGYW PGDVGGVDAA DERVTRHACD RLAAEDVAFA FVYFHLVDAV GHDVGTGEPY RAAIETTDAR VGRVLDAVAS RPSRGREEWT VIALTDHGHR PEGGHGGRSD DERAAWIRAC GPGLREAAVR RDLTHEDVAA QALVTLGLPL PDQITGRALT ACPTQRAAAT RPTTQEDAT
|
| |