Gene Bcav_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3187 
Symbol 
ID7857943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3541520 
End bp3542389 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content76% 
IMG OID643867287 
Producttype I phosphodiesterase/nucleotide pyrophosphatase 
Protein accessionYP_002883193 
Protein GI229821667 
COG category[R] General function prediction only 
COG ID[COG1524] Uncharacterized proteins of the AP superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.280318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0143084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCAGC ACGTGCTGGT GCTCGCCCTC GACGGCGTCC ACGCCGGCAT CCTCGCGACG 
TGCGCCACCC CGCACCTCGA CGGCGTCGCG GCCCGCGGGT TCGCGCGCGA CATCCGCATC
CGCGAGGGCG AGCCGACGAT CAGCGGGCCC ATCTGGACCT CGGCCATGAC CGGCGTGCCC
TCGGCGACCC ACGGCGTCCG GGACAACGAC CTCAGCCGGT ACACGCGCCG CGAGCACCCG
GACGTCGCCA CGATCCTCGG CGACGCCGAC CCGGGGCTGC GCACCCTCGT CGCCGCGCAC
TGGGCACCTC TGGTGACGGG GGCCTCCGGT GGGCCGTTGT TCGCCACCGG CGGGTACTGG
CCCGGCGACG TGGGCGGGGT CGACGCGGCC GACGAGCGCG TCACCAGGCA CGCCTGCGAC
CGGCTCGCCG CCGAGGACGT GGCGTTCGCG TTCGTGTACT TCCACCTCGT CGACGCCGTC
GGGCACGACG TCGGTACCGG CGAGCCCTAC CGTGCGGCGA TCGAGACCAC CGACGCCCGG
GTCGGGCGGG TGCTCGACGC CGTCGCGTCG AGGCCCTCGC GGGGGCGCGA GGAGTGGACG
GTGATCGCGC TGACGGACCA CGGCCACCGC CCCGAGGGCG GACACGGCGG GCGGAGCGAC
GACGAGCGGG CCGCATGGAT CCGTGCGTGC GGGCCGGGAC TCCGCGAGGC CGCCGTCCGG
CGGGACCTCA CCCACGAGGA CGTGGCGGCC CAGGCGCTCG TGACCCTGGG CCTGCCGCTC
CCGGATCAGA TCACCGGACG CGCACTCACC GCGTGCCCGA CCCAGCGGGC CGCCGCGACG
CGGCCCACCA CGCAGGAGGA CGCCACATGA
 
Protein sequence
MRQHVLVLAL DGVHAGILAT CATPHLDGVA ARGFARDIRI REGEPTISGP IWTSAMTGVP 
SATHGVRDND LSRYTRREHP DVATILGDAD PGLRTLVAAH WAPLVTGASG GPLFATGGYW
PGDVGGVDAA DERVTRHACD RLAAEDVAFA FVYFHLVDAV GHDVGTGEPY RAAIETTDAR
VGRVLDAVAS RPSRGREEWT VIALTDHGHR PEGGHGGRSD DERAAWIRAC GPGLREAAVR
RDLTHEDVAA QALVTLGLPL PDQITGRALT ACPTQRAAAT RPTTQEDAT