| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3166 |
|---|
| Symbol | |
|---|
| ID | 7859451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 3520461 |
|---|
| End bp | 3522014 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643867264 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002883172 |
|---|
| Protein GI | 229821646 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.143728 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGC GGTCGACGGG CCGGACCGAG CCGGCCGAGG CCCCGGCGGC GCGGCGCACC
TGGTCGCGCC GCGGCTGGAG CGTGCGCGCC CGGGTGCTCG CCGCGCTGGT CGCGCTGTCG
GGCCTGGCCC TCGCCGCGGC CGGAGTGACG GCGTACGGCA TCGAGCGCGC CAGGCTGGAC
GACCGGCTCG ACGACACGCT CGAGCGCACC GTCGAGGAGC TGCGGGCGAT CGCCGCCGGG
GACGTCGACC CGAGCACGGG CGAGCCGTTC ACGTCGGCCG AGCAGGTGCT GCGGGTGTCC
CTGCAGCGCG TCGTGCCCGC GCGGTACGAG GGCGCGTTCT CGATCGGGAC GCGCGCCGAC
GGCTCCTGGG GCGTCCTGCA GTTCGCCGAG GTCAGCGGCA TCCAGCCCCA CACCGACGCC
GCCTTCGTGA GCGAGCTGGA GGGCGCCGAG CTCGCCGAGC GGGCGACGAT CACGCGGACG
GTGACGCCGA CCGCCGACTA CCGGTACGCC GTCGCCCCCG TGCGGGTCGG CGATGCGCCG
CCCGCCGCGC TCGTCGTCGC GTTCGATCGC GGCTCCGAGC AGGCCGCCCT GGCCGCGACG
TACCGGCAGT ACGCGGCCAT GGCCGCCGTC GCCCTGGCCG GGATCGCGCT CGTCGGCTGG
CTCGTCGTCG GCCGCGTCGT GCGACCGATC CGGCTGGTGC GACGCACGGC GCAGGAGATC
TCGGAGTCCG ACCTGTCCGC GCGCATCCCC GTGGTCGGCA ACGACGACCT CGCCGACCTC
ACCGTGACCG TCAACGACAT GCTGGACCGC CTCGAGACGT CGTTCGCGGA CCAGCGGCAG
CTGCTCGACG ACGTCGGGCA CGAGCTCCGG ACGCCCCTGA CGGTGGTCCG CGGGCACCTC
GAGCTCATGG ACCCGGCGGA TCCCGAGGAC GCCGCGCAGA CCCGCGCGCT GGCGATGGAC
GAGCTGGACC GCATGTACGG CCTCGTCGAC GACCTCGTGA CGCTCGCCCG CGCCGAGCGG
CCGGACTTCG TGCGGCGCCG GGAGGTGGAC GTGGCGGTGC TCGTGGACGA GGTGCTGGCG
AAGGCCCGCC CGCTCGGCGA GCGACGGTGG CGGCTGGACG CGCTTCCCGA GGGCACCGCC
GAGCTCGACC CCCAACGCCT GACGCAGGCG CTGCTCCAGC TCGCCTCGAA CGCCGTGCGT
TTCTCCGACG ACGGCTCGAC CGTGGGGCTC GGCGGCGCGT GGTCCGGTGA CGGCGCGCTC
GAGCTGTGGG TGCGAGACGA AGGCATCGGG ATCGCCGAGG AGGAGCAGGC CCACGTGTTC
CAACGATTCG CTCGAGGCTC GACCGCCCGC GCTCGCGGCG ACGGCTCCGG CCTCGGGCTG
GCCATCGTCG CCTCCATCGC CCACGCGCAC GGCGGGAGCG TGACGCTCGA CAGCGCGCCC
GGGCGCGGCA CCACGGTGAC GCTGCGGATC CCGGACGCCG GCCTGCCCGA CCCCGACGCC
GACGCCCCCC ACGACGCCGC GGACCCCCCG GCCAGGCAGC AGGAGGCCCC ATGA
|
|---|
| Protein sequence | MAERSTGRTE PAEAPAARRT WSRRGWSVRA RVLAALVALS GLALAAAGVT AYGIERARLD
DRLDDTLERT VEELRAIAAG DVDPSTGEPF TSAEQVLRVS LQRVVPARYE GAFSIGTRAD
GSWGVLQFAE VSGIQPHTDA AFVSELEGAE LAERATITRT VTPTADYRYA VAPVRVGDAP
PAALVVAFDR GSEQAALAAT YRQYAAMAAV ALAGIALVGW LVVGRVVRPI RLVRRTAQEI
SESDLSARIP VVGNDDLADL TVTVNDMLDR LETSFADQRQ LLDDVGHELR TPLTVVRGHL
ELMDPADPED AAQTRALAMD ELDRMYGLVD DLVTLARAER PDFVRRREVD VAVLVDEVLA
KARPLGERRW RLDALPEGTA ELDPQRLTQA LLQLASNAVR FSDDGSTVGL GGAWSGDGAL
ELWVRDEGIG IAEEEQAHVF QRFARGSTAR ARGDGSGLGL AIVASIAHAH GGSVTLDSAP
GRGTTVTLRI PDAGLPDPDA DAPHDAADPP ARQQEAP
|
|---|
| |