| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3155 |
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| Symbol | rpoB |
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| ID | 7859439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3509803 |
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| End bp | 3513312 |
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| Gene Length | 3510 bp |
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| Protein Length | 1169 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643867252 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_002883161 |
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| Protein GI | 229821635 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.268483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTGCCT CGCGCACCCC TTCGAACGCT GACGCCATCG CTACCCGTAC TGCCTCGCGA
AGGGTTTCCT TCGCGAAGAT CACGGAGCCG CTCCAGGCAC CGGATCTTCT GAGCCTCCAG
ACCAACAGCT TCGACTGGCT GCTCGGCAAC GAGCGCTGGC GCGCTCGGGT CGACGCGGCG
GCGAGCAAGA ACGTCTCGGT CCCCTCGTCG TCGGGCCTCG AGGAGATCTT CTCCGAGATC
TCCCCGATCG AGGACTTCGG CGGGTCGATG TCGCTCTCGT TCCGCGACCA CCGCTTCGAG
CCGGCGAAGT ACACGCCGGA GGAGTGCAAG GAGAAGGACT TCACCTACTC CGCGCCGCTC
TTCGTGACCG CCGAGTTCGT CAACTACACG ACCGGCGAGA TCAAGTCGCA GACCGTGTTC
ATGGGCGACT TCCCGCTGAT GACCGAGCGC GGCACGTTCA TCATCAACGG CACCGAGCGC
GTCGTCGTCA GCCAGCTCGT GCGTTCGCCG GGCGTCTACT TCGAGCGCAC GCCTGACAAG
ACGTCCGACA AGGACGTCTT CACCGCGAAG ATCATCCCCA GCCGCGGCGC GTGGCTCGAG
TTCGAGATCG ACAAGCGTGA CGCCGTCGGC GTGCGCGTCG ACCGCAAGCG CAAGCAGTCG
ATCACCGTCT TCCTCAAGGC GCTCGGCCTG TCCGAGGCGG AGATCCGCGA GCAGTTCGCC
GACTACCCGG TCGTGATCGA GACGCTCGAG AAGGACACGG TCAACACCCG TGAGGAGGCG
CTGCTCGACA TCTACCGGAA GATCCGGCCG GGCGAGCCGC CCACGGTCGA GGCCGGCGCC
GCGCTGCTCG AGAACTTCTA CTTCAACCCG AAGCGCTACG ACCTCGCGAA GGTCGGTCGC
TACAAGATCG ACAAGAAGCT CGGCCTCGAC GCGCCTCTCA CCGACTCGGT GATGCAGGTC
GCCGACGTCG TCGCCACGAT CAAGTACCTC GCCGCGCTGC ACAAGGGCGT CACGGAGCTC
ACCGGCACGC GTTCCGGCGA GGAGGTCGCC CTGCGCGTCG AGACCGACGA CATCGACCAC
TTCGGCAACC GCCGCATCCG CGCCGTCGGC GAGCTCATCC AGAACCAGGT CCGCACCGGG
CTGTCGCGCA TGGAGCGGGT CGTCCGCGAG CGGATGACGA CGCAGGACGT CGAGGCGATC
ACGCCGCAGA CCCTGATCAA CATCCGCCCC GTGGTGGCGT CGATCAAGGA GTTCTTCGGC
ACGTCGCAGC TGTCCCAGTT CATGGACCAG AACAACCCGC TCGCGGGCCT GACGCACAAG
CGGCGTCTGT CGGCCCTCGG CCCCGGCGGG CTGTCCCGTG ACCGCGCCTC GATGGAGGTC
CGGGACGTCC ACCCGTCGCA CTACGGCCGC ATGTGCCCGA TCGAGACGCC GGAAGGCCCG
AACATCGGCC TCATCGGTTC GCTCGCGACG TACGCGCGCA TCAACCCGTT CGGGTTCGTG
GAGACGCCGT ACCGCAAGGT CGTCAAGGGG AAGGTGACGG ACGACGTCGT CTACCTCACG
GCCGACGACG AGGACCGCCA CGTCATCGCC CAGGCCAACG CGCCGCTGTC GGAGAAGAGC
ACGTTCGTCG AGGCCACCGT CCTGGTGCGC ACCCGTGGCG GCGAGGCGGA GCTCGTCCCG
GCCGCCGAGG TGGACTACAT GGACGTCTCG CCGCGCCAGA TGGTGTCGGT CGCGACGGCG
ATGATCCCGT TCCTCGAGCA CGACGACGCG AACCGCGCGC TCATGGGCGC GAACATGCAG
CGGCAGGCGG TGCCGCTCGT CCGGAGCGAG GCGCCGCTGG TCGGCACCGG CATGGAGCGT
CGTGCGGCCG TCGACGCCGG CGACGTCATC GTCGCCGCGA AGCCGGGCGT CGTCGCCGAG
GTGTCAGCCG ACGCGATCGT CGTCGCCCAG GACGACGGGA CGACGTTCAC GTACAAGGTC
GCGAAGTTCC ACCGCTCGAA CCAGGGAACC TCCTACAACC AGCGTGTGCT GGTCTCCGAG
GGCGCTCGGG TCGAGGTCGG CTCGGTGCTC GCGGACGGCC CGGCGACGGA CGAGGGCGAG
CTGGCGCTCG GCCGGAACCT CCTCGTGGGC TTCATGTCCT GGGAGGGGCA CAACTACGAG
GACGCGATCA TCCTGTCGCA GCGCCTCGTG GCCGAGGACG TGCTCTCCTC GATCCACATC
GAGGAGCACG AGGTCGACGC CCGCGACACG AAGCTCGGCC CCGAGGAGAT CACGCGGGAC
ATCCCGAACG TCTCCGAGGA GGTCCTGGCG GACCTCGACG AGCGCGGCAT CATCCGGATC
GGTGCCGAGG TCGGTGCGGG CGACGTGCTC GTCGGCAAGG TCACCCCGAA GGGCGAGACC
GAGCTGACCC CGGAGGAGCG GCTGCTCCGC GCGATCTTCG GCGAGAAGGC GCGCGAGGTC
CGCGACACGT CCCTCAAGGT GCCGCACGGC GAGTCCGGCA CGGTCATCGG CGTGCGCGAG
TTCAACCGGG AGGACGGCGA CGAGCTGCCT CCGGGCGTGA ACCAGCTCGT GCGGGTGTAC
GTGGCGCAGC GCCGGAAGAT CACCGACGGC GACAAGCTCG CCGGCCGTCA CGGCAACAAG
GGCGTCATCT CGAAGATCCT CCCGATCGAG GACATGCCGT TCCTGTCCGA CGGCACGCCG
CTCGACATCG TGCTCAACCC GCTCGGCGTG CCGGGCCGGA TGAACGTCGG CCAGGTCCTC
GAGACGCACC TCGGGTGGGT CGCCAAGCAG GGCTGGGACG CCGGGATCGA GGACGCCAAG
AAGGGCAAGC TCCCGAGCTG GGCGCAGCAC CTCGACCGTG GCGCGCTCCA GGGCGAGCCG
GGTACGCCGG TCGCCACGCC GGTCTTCGAC GGCGTTCGCG AGGACGAGCT GGCGGGTCTC
CTGGACTCCA CGCTCGTCAC GCGTGACGGC GAGCGGCTCG TGGACTCCAG CGGCAAGGCG
CTGCTGTTCG ACGGTCGCAG CGGTGAGCCG TTCCCGGAGC CGATCGCCGT CGGCTACATG
TACATCCTCA AGCTGCACCA CCTGGTCGAC GACAAGATCC ACGCGCGCTC GACCGGTCCG
TACTCGATGA TCACGCAGCA GCCGCTGGGC GGTAAGGCGC AGTTCGGCGG TCAGCGGTTC
GGCGAGATGG AGGTGTGGGC GCTCGAGGCG TACGGCGCGG CCTACGCGCT GCAGGAGCTC
CTCACCATCA AGTCCGACGA CGTCCCGGGC CGCGTGAAGG TCTACGAGGC GATCGTCAAG
GGGGAGAACA TCCCCGAACC CGGCATCCCG GAGTCCTTCA AGGTCCTCAT CAAGGAGATG
CAGTCGCTCT GCCTGAACGT GGAGGTGCTG TCCAGCGACG GCACGTCCAT CGAGATGCGC
GACACCGACG AGGAGGTGTA CCGGGCCGCC GAGGAGCTCG GGATCGACCT CTCGCGGCGA
CCCGACGCCA GCAGCGTCGA AGAGATCTGA
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| Protein sequence | MAASRTPSNA DAIATRTASR RVSFAKITEP LQAPDLLSLQ TNSFDWLLGN ERWRARVDAA
ASKNVSVPSS SGLEEIFSEI SPIEDFGGSM SLSFRDHRFE PAKYTPEECK EKDFTYSAPL
FVTAEFVNYT TGEIKSQTVF MGDFPLMTER GTFIINGTER VVVSQLVRSP GVYFERTPDK
TSDKDVFTAK IIPSRGAWLE FEIDKRDAVG VRVDRKRKQS ITVFLKALGL SEAEIREQFA
DYPVVIETLE KDTVNTREEA LLDIYRKIRP GEPPTVEAGA ALLENFYFNP KRYDLAKVGR
YKIDKKLGLD APLTDSVMQV ADVVATIKYL AALHKGVTEL TGTRSGEEVA LRVETDDIDH
FGNRRIRAVG ELIQNQVRTG LSRMERVVRE RMTTQDVEAI TPQTLINIRP VVASIKEFFG
TSQLSQFMDQ NNPLAGLTHK RRLSALGPGG LSRDRASMEV RDVHPSHYGR MCPIETPEGP
NIGLIGSLAT YARINPFGFV ETPYRKVVKG KVTDDVVYLT ADDEDRHVIA QANAPLSEKS
TFVEATVLVR TRGGEAELVP AAEVDYMDVS PRQMVSVATA MIPFLEHDDA NRALMGANMQ
RQAVPLVRSE APLVGTGMER RAAVDAGDVI VAAKPGVVAE VSADAIVVAQ DDGTTFTYKV
AKFHRSNQGT SYNQRVLVSE GARVEVGSVL ADGPATDEGE LALGRNLLVG FMSWEGHNYE
DAIILSQRLV AEDVLSSIHI EEHEVDARDT KLGPEEITRD IPNVSEEVLA DLDERGIIRI
GAEVGAGDVL VGKVTPKGET ELTPEERLLR AIFGEKAREV RDTSLKVPHG ESGTVIGVRE
FNREDGDELP PGVNQLVRVY VAQRRKITDG DKLAGRHGNK GVISKILPIE DMPFLSDGTP
LDIVLNPLGV PGRMNVGQVL ETHLGWVAKQ GWDAGIEDAK KGKLPSWAQH LDRGALQGEP
GTPVATPVFD GVREDELAGL LDSTLVTRDG ERLVDSSGKA LLFDGRSGEP FPEPIAVGYM
YILKLHHLVD DKIHARSTGP YSMITQQPLG GKAQFGGQRF GEMEVWALEA YGAAYALQEL
LTIKSDDVPG RVKVYEAIVK GENIPEPGIP ESFKVLIKEM QSLCLNVEVL SSDGTSIEMR
DTDEEVYRAA EELGIDLSRR PDASSVEEI
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