| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3154 |
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| Symbol | |
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| ID | 7859438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3505820 |
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| End bp | 3509710 |
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| Gene Length | 3891 bp |
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| Protein Length | 1296 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643867251 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_002883160 |
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| Protein GI | 229821634 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTCGACG TCAATGTCTT CGACGAGCTG CGCATCGGTC TCGCGACAGC CGACGACGTC
CGTGCCTGGT CGCACGGCGA GGTCAAGAAG CCCGAGACGA TCAACTACCG CACCCTCAAG
CCCGAGAAGG ACGGACTCTT CTGCGAGAAG ATCTTCGGCC CCACCCGGGA CTGGGAGTGC
TACTGCGGGA AGTACAAGCG CGTCCGCTTC AAGGGCATCA TCTGCGAGCG GTGCGGCGTC
GAGGTCACCC GCTCGAAGGT GCGCCGTGAG CGGATGGGCC ACATCGAGCT CGCCGCGCCG
GTCACGCACA TCTGGTACTT CAAGGGCGTC CCGTCGCGCC TCGGCTACCT GCTCGACCTC
GCCCCGAAGG ACCTCGAGAA GGTCATCTAC TTCGCGGCGT ACATGATCAC CGAGGTCGAC
GACGAGCGCC GGCACACCGA CCTGCCGAGC CTCCAGAACG AGATCGACCT GGAGCGCGGC
GAGGTGGCGA AGCGTCGCGA CCTCGACATC GAGGCGCGCG CCCAGCGGCT CGAGGCCGAC
CTGGCCGAGC TCGAGGCAGA GGGCGCGAAG GCTGACGCAC GCCGCAAGGT GCGCGACTCC
GCCGAGCGCG AGATGGCGCA GATCCGCAAG CGGTCCGACG CCGAGCTCGA CCGGCTCGAG
CGCGTGTGGG ACCGCTTCAA GAACCTCAAG GTCGCCGACC TCGAGGGCGA CGAGCTCCTG
TACCGCGAGC TCGAGCAGCG CTACGGCTCG TACTTCACGG GCTCGATGGG CGCCGCGGCG
ATCCAGAAGC GTCTCGAGAC GTTCGACCTG GACGCCGAGG CCGAGGCGCT GCGCGAGACG
ATCCGCTCCG GCAAGGGGCA GCGCAAGACG CGCGCTCTCA AGCGGCTCAA GGTCGTCAAC
GCGTTCATGA CGACGACGAA CTCGCCGCTC GGCATGGTGC TCGACTGCAT CCCGGTCATC
CCGCCGGACC TGCGCCCCAT GGTGCAGCTC GACGGTGGCC GGTTCGCGAC GAGCGACCTC
AACGACCTGT ACCGCCGGGT CATCAACCGG AACAACCGGC TCAAGCGTCT GCTCGACCTC
GGCGCGCCCG AGATCATCGT GAACAACGAG AAGCGGATGC TGCAGGAGGC CGTCGACGCG
CTGTTCGACA ACGGCCGCCG CGGCCGACCG GTCACCGGTC CGGGCAACCG CCCGCTGAAG
TCGATCTCCG ACATGCTCAA GGGCAAGCAG GGGCGGTTCC GCCAGAACCT GCTCGGCAAG
CGCGTCGACT ACTCGGGCCG CAGCGTCATC GTCGTCGGCC CGCAGCTGAA GCTGCACCAG
TGCGGCCTGC CGAAGCAGAT GGCGCTCGAG CTGTTCAAGC CGTTCGTCAT GAAGCGGCTC
GTCGACCTCA ACCACGCGCA GAACATCAAG TCCGCGAAGC GGATGGTGGA GCGCGCGCGG
TCGGTCGTGT GGGACGTGCT GGAAGAGGTC ATCACGGAGC ACCCCGTGCT GCTCAACCGG
GCGCCCACGC TGCACCGTCT GGGCATCCAG GCGTTCGAGC CGCAGCTCGT CGAGGGCAAG
GCGATCCACC TGCACCCGCT CGTCTGCGCC GCGTTCAACG CGGACTTCGA CGGCGACCAG
ATGGCCGTCC ACCTGCCCCT GTCCGCCGAG GCGCAGGCCG AGGCGCGCAT CCTCATGCTC
TCGAGCAACA ACATCCTCAA GCCGTCGGAC GGCCGTCCGG TGACCATGCC CTCCCAGGAC
ATGATCATCG GCCTGTACCA CCTGACGAGC GACAAGGACG AGGCGCTCGG CGCCGGGCGT
TCGTTCTCGT CGATCGCCGA GGCGATCATG GCGTTCGACG CCGGAGGGCT CGACCTCAAC
GCGGTCGTCA AGATCCGGTT CACGGACCTC GTGCCGCCGA CCGGGTTCGA GGCCCCCGAG
GGGTGGACCG AGGGCGAGTC GCTGCTGTTC GAGACCACCC TGGGTCGCGC GCTGTTCAAC
GAGGCGCTGC CCGTGGACTA CCCGTTCGTG AACGGGGTCG TCGGCAAGGG CGAGCTCTCG
GTGATCGTCA ACGACCTGGC CGAGCGGTAC CCGAAGGTCG AGGTCGCCGC GAGCCTGGAC
GCGCTCAAGG AGGCCGGCTT CTCGTGGGCC ACCCGGTCGG GTGTCACCAT CGCGATCTCG
GACGTCGTCA CGCCGTCCCG CAAGAAGGAG ATCGTCGAGT CGTACGAGAA GAAGGCCGCC
AAGGTCCAGG GTCAGTACGA GAAGGGTCTG ATCACCGACG AGGAGCGCCG TACGGAGCTC
ATCGACATCT GGACCCAGGC GACCAACGAC GTCGACGCGG CGATGCGGGA GAACTTCCCG
GAGCGCAACA CGGTCAACCG CATGGTCGGC TCCGGGGCGC GAGGCAACTG GATGCAGGTG
CGCCAGATCG CCGGTATGCG TGGCCTGGTG GCGAACCCGA AGGGCGAGAT CATCCCGCGC
CCGATCCTCT CGAACTACCG CGAGGGTCTG TCGGTCGTCG AGTACTTCAT CGCGACGCAC
GGCGCTCGGA AGGGTCTGGC GGACACCGCG CTGCGGACCG CCGACTCCGG GTACCTCACG
CGTCGTCTGG TGGACGTGTC GCAGGACGTC ATCATCCGTG AGGAGGACTG CGGCACCGAC
CGTGGCCTCG TCACGACGAT CGCCGAGGTC GGCCCGGACG GCGTCCGTCG CCGTTCCGAG
ACCGTCGAGA CCGGTGCGTA CGCCCGCACG CTCGCGACCA CCGTCACGAG CGAGGACGGC
ACCGTGCTCG CGGAGGGCGG CGACGACGTC GGCGACGTGC TCATCTCGCG CCTCGTCGAG
GCCGGGGTCG ACACGATCAA GGTGCGCTCG GTCCTCACGT GCGCCTCGCG GGTCGGCACG
TGCGCGAAGT GCTACGGCCG GTCGCTCGCG ACGGGCAAGC TCGTCGACGT CGGCGAGGCG
GTCGGCATCA TCGCCGCCCA GTCGATCGGT GAGCCGGGCA CGCAGCTGAC GATGCGCACG
TTCCACACCG GTGGCGTCGC CTCGGCGGAC GACATCACGC AGGGTCTGCC GCGCGTGCAG
GAGCTGTTCG AGGCCCGCAC CCCCAAGGGT GAGGCGCCGA TCAGCGAGGT CGCCGGCCGG
ATCGCGATCG ACGAGACCGA CCGCACGCGT CGGATCGTCG TCACGCCGGA CGACGGCGCC
GAGGAGATCG TGTACCCGAT CACGAAGCGG TCGCGGCTGC TCGTGAACGA CGGCGACCAC
GTGGCGGTGG GCCAGCAGCT CATCGCCGGT GCGGTCGACC CGAAGAAGGT GCTGCGCATC
CTCGGCCCGC GTGCCGTGCA GAAGCACCTG GTCGACGAGG TGCAGGAGGT CTACCGCTCG
CAGGGCGTGG ACATCCACGA CAAGCACATC GAGGTCATCG TCCGGCAGAT GCTGCGGCGG
GTCACCGTGC TCGACTCCGG TGAGGCGAAC CTGCTGCCCG GCGAGCTCGC CGAGCGTGGG
CGCTTCGAGG ACGAGAACCG GCGCGTCGTG TCCGAGGGCG GGACCCCGGC CTCCGGCCGG
CCCGAGCTCA TGGGCATCAC GAAGGCGTCG CTCGCGACGG ACTCGTGGCT CTCGGCGGCC
TCCTTCCAGG AGACGACGAA GGTGCTCACG GAGGCGGCCC TCAGCGGGCG CAGCGACTCG
CTGCTCGGCC TGAAGGAGAA CGTCATCCTG GGCAAGCTCA TCCCGGCGGG TACCGGTCTT
CCGCGGTACC GCAACGTGCG GGTGGAGCCG ACCGAGGAGG CGAAGGCCGA GCTGTACCCG
AGCTTCGGGT ACGACGAGAT CGACTACCTC CCCCTCGGCA CCGGCTCCGG CGAGGCGATC
GCGCTGGAGG AGCTCGACCT CGGTCGCGGC TACGAGGCGG ACTATCGCTG A
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| Protein sequence | MLDVNVFDEL RIGLATADDV RAWSHGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
YCGKYKRVRF KGIICERCGV EVTRSKVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL
APKDLEKVIY FAAYMITEVD DERRHTDLPS LQNEIDLERG EVAKRRDLDI EARAQRLEAD
LAELEAEGAK ADARRKVRDS AEREMAQIRK RSDAELDRLE RVWDRFKNLK VADLEGDELL
YRELEQRYGS YFTGSMGAAA IQKRLETFDL DAEAEALRET IRSGKGQRKT RALKRLKVVN
AFMTTTNSPL GMVLDCIPVI PPDLRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLLDL
GAPEIIVNNE KRMLQEAVDA LFDNGRRGRP VTGPGNRPLK SISDMLKGKQ GRFRQNLLGK
RVDYSGRSVI VVGPQLKLHQ CGLPKQMALE LFKPFVMKRL VDLNHAQNIK SAKRMVERAR
SVVWDVLEEV ITEHPVLLNR APTLHRLGIQ AFEPQLVEGK AIHLHPLVCA AFNADFDGDQ
MAVHLPLSAE AQAEARILML SSNNILKPSD GRPVTMPSQD MIIGLYHLTS DKDEALGAGR
SFSSIAEAIM AFDAGGLDLN AVVKIRFTDL VPPTGFEAPE GWTEGESLLF ETTLGRALFN
EALPVDYPFV NGVVGKGELS VIVNDLAERY PKVEVAASLD ALKEAGFSWA TRSGVTIAIS
DVVTPSRKKE IVESYEKKAA KVQGQYEKGL ITDEERRTEL IDIWTQATND VDAAMRENFP
ERNTVNRMVG SGARGNWMQV RQIAGMRGLV ANPKGEIIPR PILSNYREGL SVVEYFIATH
GARKGLADTA LRTADSGYLT RRLVDVSQDV IIREEDCGTD RGLVTTIAEV GPDGVRRRSE
TVETGAYART LATTVTSEDG TVLAEGGDDV GDVLISRLVE AGVDTIKVRS VLTCASRVGT
CAKCYGRSLA TGKLVDVGEA VGIIAAQSIG EPGTQLTMRT FHTGGVASAD DITQGLPRVQ
ELFEARTPKG EAPISEVAGR IAIDETDRTR RIVVTPDDGA EEIVYPITKR SRLLVNDGDH
VAVGQQLIAG AVDPKKVLRI LGPRAVQKHL VDEVQEVYRS QGVDIHDKHI EVIVRQMLRR
VTVLDSGEAN LLPGELAERG RFEDENRRVV SEGGTPASGR PELMGITKAS LATDSWLSAA
SFQETTKVLT EAALSGRSDS LLGLKENVIL GKLIPAGTGL PRYRNVRVEP TEEAKAELYP
SFGYDEIDYL PLGTGSGEAI ALEELDLGRG YEADYR
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