Gene Bcav_3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3149 
Symbol 
ID7859433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3500876 
End bp3502258 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content70% 
IMG OID643867246 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002883155 
Protein GI229821629 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA GCGCCGGGGC CCACGCCCCG TCCGGCGGGG GCGCCCCCGC CGTGGTGGAC 
CCGCGACGCG GTGCGAGCGC ACTGCGGTAC GGCGTCGGCA TGTTCGGCAC CTCGCTGCCG
ATCAATATGT TCCGCGCGTA CATGACGATC TACTACGTCG ACGAGCTGGG GCTCGACACG
TACTGGTACG GGATCGTCAT GGTCGCCTAC GCGATCATCG ACGCCGTCGA CAACCCGGTC
TTCGGCTACC TCACGGACCG GACCCGGAGC CGATGGGGCA GGCGGAAGCC CTGGCTGGTC
GTCGGCGCAC CGGTACTGGC CCTCGCGCTC GTCGTGTTCT TCTCCCCGCC CGAGAACGCC
AGCGACGTCG TCATCCTCGT CTGGTTCGCG GTGTTCGCGA TCGGGATGGA GACCGTCGAC
TCCCTGATCA ACGCGAGCTA CGGCGCCCTC CTGCCCGAGA TGTTCCCCGG CGAGCGCGAA
CGGGCGAAGG CCAACGCCGT CCGGCAGGCG TTCCAGCTCG CCGCCATGGT GATCGGCATC
GCACTGACGC CGATCGTCGT GGACCTGCTC GGTTACGCGA CGACGGCGAT CGTGTACGGA
GTCGTCGCCG CGGCGGTCAT CCTGTGGTCG GCCCTCGGGG CGAAGGAGAA CCCCGCCGTC
CAGACCGAGC CGGGTCCGCG CATCTGGGAC TCGGTCAAGG TCATCTTCAG CACCGCGAAG
TTCTGGGCGG TCGCGATCAC GGGTGGCCTG TACGCGGGTG CCACGGGACT CATCATCGCG
GCCATCCCGT TCCTCGCGGA GTACACGCTC GTCCTGGCCG CCTGGCAGAC GTCCGTCCTG
TTCGCGTCCG TGCTGCTCGT GGCGGTGGCG TGCCTCCCGC TGTGGACGGC CGTGGTCCGA
CGGCGCGGCG CGCTCTGGAC GTGGCAGTGG GCGCTCGTCG CGTTCGCCGT CGCGATGCTC
CCGATGCTGC TCGCCCGCGA CTTCGTCGTC GCGGTCGTCT GCGGCATCGT CATCGGTGTC
GGGTACTCGG GCGTCCTCGC GACGGCGGAC CTCGTCGTCG CGAAGCTGCT GGACGAGGAC
ACCCTGCGGA CGGGCGTGCA CCGCGAGGGC ATGTTCCTCG CGGCGATCGG GTTCTTCAAC
CGGCTCAACG GACTCGTCCG CGGAGCCGCG TTCGTGCTCG CCGGCGCGCT GTTCGGGTTC
CGGAGCGGCG ACAACCCCGG TGACCGCCCG GACCAGGCGG GCCTGTTCCT GGCGGTCGTC
GCTCCCGCGG CGTTCCTGGC GCTCGCCGCG ATCGCCGCCC GGTTCGTCCG CTTCGACGAC
GACGTCACGC CGCCGGACAT CGACGCCGTC ATCGCCGCCG AACGGATGGA CGAGCAGCGA
TGA
 
Protein sequence
MTNSAGAHAP SGGGAPAVVD PRRGASALRY GVGMFGTSLP INMFRAYMTI YYVDELGLDT 
YWYGIVMVAY AIIDAVDNPV FGYLTDRTRS RWGRRKPWLV VGAPVLALAL VVFFSPPENA
SDVVILVWFA VFAIGMETVD SLINASYGAL LPEMFPGERE RAKANAVRQA FQLAAMVIGI
ALTPIVVDLL GYATTAIVYG VVAAAVILWS ALGAKENPAV QTEPGPRIWD SVKVIFSTAK
FWAVAITGGL YAGATGLIIA AIPFLAEYTL VLAAWQTSVL FASVLLVAVA CLPLWTAVVR
RRGALWTWQW ALVAFAVAML PMLLARDFVV AVVCGIVIGV GYSGVLATAD LVVAKLLDED
TLRTGVHREG MFLAAIGFFN RLNGLVRGAA FVLAGALFGF RSGDNPGDRP DQAGLFLAVV
APAAFLALAA IAARFVRFDD DVTPPDIDAV IAAERMDEQR