Gene Bcav_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3125 
SymbolrpmD 
ID7859409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3486266 
End bp3486454 
Gene Length189 bp 
Protein Length62 aa 
Translation table11 
GC content69% 
IMG OID643867222 
Product50S ribosomal protein L30 
Protein accessionYP_002883131 
Protein GI229821605 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGC TCAAGGTCAC GCAGACCCGG TCCACGATCG GGGGCAAGCA GAACCAGCGT 
GAGACGCTGG CGACGCTCGG CCTCGGCCGG ATCGGGAAGT CCACCGTCCA GGAGGACACC
CCGGGCGTGC GCGGCATGAT CCGGGTGGTC GCCCACCTGG TGAGCGTCGA GGAGGTCGAC
GAGTCATGA
 
Protein sequence
MAQLKVTQTR STIGGKQNQR ETLATLGLGR IGKSTVQEDT PGVRGMIRVV AHLVSVEEVD 
ES