| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3113 |
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| Symbol | |
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| ID | 7859397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3474908 |
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| End bp | 3475924 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643867210 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_002883119 |
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| Protein GI | 229821593 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.303323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCATCG CACAGCGCCC CACCCTGACC GAAGAGGTCG TCGCCGACAA CCGCTCGCGT
TTCGTCATCG AGCCGCTCGA GCCCGGTTTC GGCTACACCC TCGGCAACTC CCTGCGCCGC
ACCCTGCTGT CGTCCATCCC GGGCGCAGCG GTGACGAGCA TCCGGATCGA CGGTGTGCTC
CACGAGTTCA CCACCGTGCC GGGGGTCAAG GAGGATGTCA CCGAGATCAT CCTCAACATC
AAGAACATCG TCGTCTCCAG CGAGAACGAC GAGCCGGTGG TCATGTACCT GCGCAAGCAG
GGCCCCGGCG TCGTGACGGC CGCGGACATC ACGCCGCCGG CCGGCGTCGA GGTGCACAAC
CCCGACCTGC ACATCGCGAC GGTCAACGGC AAGGGCAAGC TCGAGGTCGA GCTGACCGTC
GAGCGTGGGC GCGGTTACGT CTCGGCGCAG CAGAACAAGG CGTACGACAC CGAGATCGGC
CGGATCCCCG TCGACTCGAT CTACTCGCCG GTGCTCAAGG TGACGTACAA GGTCGAGGCG
ACCCGTGTCG AGCAGCGCAC CGACTTCGAC AAGCTCATCG TCGACGTCGA GTCCAAGCCG
GCCATCTCGC CGCGTGACGC CGTCGCCTCG GCGGGCAAGA CGCTCGTCGA GCTGTTCGGC
CTCGCCCGCG AGCTGAACAC CGCGGCCGAG GGCATCGAGA TCGGCCCGTC GCCGACGGAC
GCCGCGCTCG CTGCCGACCT GGCGCTGCCG ATCGAGGATC TCGACCTCAC GATCCGCTCG
TACAACTGCC TCAAGCGCGA GGGCATCCAC CAGGTGGGCG AGCTCGTCGC TCGCAGCGAG
GCGGACCTCC TCGACATCCG GAACTTCGGT GCGAAGTCGA TCACCGAGGT CAAGGAGAAG
CTCGCGGCGC TCGGCCTGTC CCTCAAGGAC AGCCCGGCCG ACTTCGACCC CTCGCTCGTC
ACCGACGCGT ACGACGGCGA CCTCGACGCC GACTACGCCG ACGAGCAGTA CAACTGA
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| Protein sequence | MLIAQRPTLT EEVVADNRSR FVIEPLEPGF GYTLGNSLRR TLLSSIPGAA VTSIRIDGVL
HEFTTVPGVK EDVTEIILNI KNIVVSSEND EPVVMYLRKQ GPGVVTAADI TPPAGVEVHN
PDLHIATVNG KGKLEVELTV ERGRGYVSAQ QNKAYDTEIG RIPVDSIYSP VLKVTYKVEA
TRVEQRTDFD KLIVDVESKP AISPRDAVAS AGKTLVELFG LARELNTAAE GIEIGPSPTD
AALAADLALP IEDLDLTIRS YNCLKREGIH QVGELVARSE ADLLDIRNFG AKSITEVKEK
LAALGLSLKD SPADFDPSLV TDAYDGDLDA DYADEQYN
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