Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3108 |
Symbol | |
ID | 7859392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3470847 |
End bp | 3471761 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643867205 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002883114 |
Protein GI | 229821588 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCACAG TCGTGATGAC CGGCGGAACG TCGGGGATCG GCCTCGTGGC CGCCTCGGCG ATGGCGGCCG CACCCGGGTC GAGGGTGATC GTCGGTGCGC GCCGGACCGG TCCGCCAGGA ACCGAGACGT TGCGGCTCGA CCTGACGCGG CTCGACGACG TCCGGTCGTT CGCCGAGAAC GTCCGACGCA CGCTCGACGA GGTTCCGATC GACGCCCTGG TGCTCAACGC CGGGGTGCTC TGCGCGGACG CCGACGGCCG CACCCCGGAC GGGTTCGAGA CCACGTTCGC CGTCAACCAC CTCGCCCACT TCCTGCTGCT CCGGCTGCTG CGCCGGCAGC TGGCCGACGG CGCGCGGGTC GTGCTCACGA CGAGCGGCAC GCACGACCCC GCGGTGAAGG TCCGGATCGT GCGGCCGCGG CACGCCGACG CGAGCCTTCT CGCGCATCCG GAGCGCGACC CGGGCCGGCA CCGTCGGGCC GGCGACGCGG GCCAGCACGC CTACACGGCG TCGAAGCTGT GCAACATCAT GACCGTGCGC GCACTCATGG CACGGTCGGC GTCGGACGGT CGCGACGTCG TCGCGATCGG CTACGACCCC GGTCCGACGC CGGGCACGGC GCTCTTCCAG GCGACCTCGC CCGTCCTCCG GCCGCCGTGG GCCATGTTCG GTGGGCGGCT CGGCCGCCTG GTGCCGACGA TGTCCACGCC GGCAGCGGCC GGCGCGGGCC TGGCGCAGGT CGTCCTCGGC GACGCCCCGC CGCCCGGCGA GTACTACGGC CGGATGACGG CGCGAGGCCT CGCCTGGGTC CAGCCGTCGG AGCTGGCGCG CGACGACGCG CTGTGCGACG CGCTGTGGGC GGACAGCGCC GAGCTGGTCG GCGCTCCACG GGACGACGTG GCACCCGGGG GCTGA
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Protein sequence | MVTVVMTGGT SGIGLVAASA MAAAPGSRVI VGARRTGPPG TETLRLDLTR LDDVRSFAEN VRRTLDEVPI DALVLNAGVL CADADGRTPD GFETTFAVNH LAHFLLLRLL RRQLADGARV VLTTSGTHDP AVKVRIVRPR HADASLLAHP ERDPGRHRRA GDAGQHAYTA SKLCNIMTVR ALMARSASDG RDVVAIGYDP GPTPGTALFQ ATSPVLRPPW AMFGGRLGRL VPTMSTPAAA GAGLAQVVLG DAPPPGEYYG RMTARGLAWV QPSELARDDA LCDALWADSA ELVGAPRDDV APGG
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