Gene Bcav_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3106 
Symbol 
ID7859390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3469571 
End bp3470014 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content68% 
IMG OID643867203 
Productribosomal protein L13 
Protein accessionYP_002883112 
Protein GI229821586 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type
[TIGR01077] ribosomal protein L13, archaeal/eukaryotic 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTACGT TCACCCCGAA GCCGTCCGAC ACCGAGCGGA CCTGGTACGT CATCGACGCG 
ACCGACGTCG TGCTCGGCCG TCTCGCGTCG CAGGTCGCGA AGCTGCTCCG CGGCAAGCAC
AAGGCGACGT TCGCCCCGCA CGTGGACACC GGTGACTTCG TCATCGTCGT GAACGCCGAC
AAGGTGGCGC TCACGGGCAA CAAGGAGCAG CAGAAGCTCG CCTACCGCCA CTCGGGCTAC
CCCGGGGGCC TCAAGGCGAC GTCCTACGCG GAGCTGCTCG AGAAGCGGCC GGAGCGGGCC
GTCGAGAAGG CGATCCGCGG CATGGTGCCC AAGAACAGCC TCGGCCGTGC GCAGATGCGC
AAGCTCAAGG TCTACGCGGG TGCCGAGCAC CCGCACGGCG CGCAGAAGCC GCAGACCTTC
GAGATCACGC AGATCGCGCA GTAG
 
Protein sequence
MRTFTPKPSD TERTWYVIDA TDVVLGRLAS QVAKLLRGKH KATFAPHVDT GDFVIVVNAD 
KVALTGNKEQ QKLAYRHSGY PGGLKATSYA ELLEKRPERA VEKAIRGMVP KNSLGRAQMR
KLKVYAGAEH PHGAQKPQTF EITQIAQ