| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3103 |
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| Symbol | def |
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| ID | 7859387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3467010 |
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| End bp | 3467663 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 643867200 |
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| Product | peptide deformylase |
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| Protein accession | YP_002883109 |
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| Protein GI | 229821583 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTGG TCCCTGCCGT CGACGCCCTT CTCGAGGCGC ACCCGGACGG CGTGCTGCCG
ATCGTGAGCG CCGGCGCGCC GGTGCTGCGG GCGCCCGCCG CGCGCTACGG CGGGGAGCTC
GGGGCCGAGC GGTTCCACCG GCTCCTCGAG GCGATGCGAG TCACGATGCG CACCGCACCG
GGTGTGGGCC TCGCCGCCCC TCAGATCGGG CTGCCGCTCG CGATCGCCGT GATCGAGGAC
CCAGGCGTCG ACGACGACGC GACGGCGGCC GCGCGCGAAC GCGTGCCCGT CGCGTTCCGT
GTGCTCGTCA ACCCGACGTA CACGCCCGCG GGACCGGAAC GCGTGTCGTT CTACGAGGGC
TGCCTCTCGG TGCCCGGCTA TGTGGCCGTA CGGGCGCGAT GGCGGCGCGT GCGGCTGCTC
GCCGCCGACG AGGCGGGGAA CGCCGTCGCC GAGGAGCTCG CAGGCTGGCC GGCGCGGATC
GTCCAGCACG AGGTCGACCA CCTCGCGGGA GAGCTGTACC TCGACGCCGC GGCGCCACGG
TCGCTGGCCT CGGACGCGCA CGCGCCCCGG TGGGCGAGCG AGGCCGTCCC GCGCGGCGCG
GCAACGGTAC TGGGCTTCCC GCTCGAGGGC GCTGAGCCGA CCCCTCGGGC GTAG
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| Protein sequence | MNLVPAVDAL LEAHPDGVLP IVSAGAPVLR APAARYGGEL GAERFHRLLE AMRVTMRTAP
GVGLAAPQIG LPLAIAVIED PGVDDDATAA ARERVPVAFR VLVNPTYTPA GPERVSFYEG
CLSVPGYVAV RARWRRVRLL AADEAGNAVA EELAGWPARI VQHEVDHLAG ELYLDAAAPR
SLASDAHAPR WASEAVPRGA ATVLGFPLEG AEPTPRA
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