Gene Bcav_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3090 
Symbol 
ID7858550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3445763 
End bp3447142 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content78% 
IMG OID643867187 
Productglycosyl transferase family 2 
Protein accessionYP_002883096 
Protein GI229821570 
COG category[S] Function unknown 
COG ID[COG3222] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.148371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.799554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGCCG CGCCCCGCGT CGACGTGATC CTGCCGTGCC TGGACGAGGC GGCCGGGCTC 
GCGTGGCTCC TGCCGCGGCT CCCCGCCGAC GCCCGCGCGA TCGTCGTGGA CAACGGCTCC
ACCGACGCCT CGTGCGTCGT CGCCCGAGCG CACGGAGCGC TCGTCGTGCA CGAACTCCGC
CGGGGGTACG GTGCCGCGCG CCACGCCGGG CTGCTCGCGG CGTCAGCCGA CGTCGTGGCG
TTCTGCGACG CCGACGGCTC CCTCGACCCG GCCGACCTCG CCCGCGTCAC CCGGCCGGTG
CTCGACGGCG AGGCGGACCT GGTCGTCGGA CGGCGCATCC CCGCGCGAGG CGCGTGGCCG
TGGCACCTGC GGCTCGCGAA CCGCGAGCTC GCGCGGCGCG TCCGCCGTCG CACCGGCGTG
CGGCTGCTCG ACGTCGGGCC CCTGCGCGCC GCTCGCCGCG TGCCGTTCCT CGACCTGGGC
CTGCAGGACC GGCGCTCCGG CTACCCCGTC GAGACGGTCG TGGCCGCCGC GGCAGCCGGG
TGGCGGGTCC GCGAGGTGCC GGTGCGGTAC CGCCCGCGGT CCGGCCGGTC GAAGGTGACC
GGAACACCGC TCGGGGCATG GCGCGCCGTC CGGGACATGA CCCGGATCCT GCGGACGCCG
CCGGCGCGCG CCAGCGCAGG CGGCGCCGTC GAGCCCCCGC GCACGACGAT CGTCCTCGCC
AAGGCACCGG TCCCCGGCCG CGCGAAGACC CGCCTCATCG GCGCGTTCTC GCCCGACGAC
GCCGCTCAGC TCGCCGCCGC CGCCCTCGCC GACACGCTCG ACGCCGTCCT GGCCTCCGGC
GTCGAGCACT GCGTCCTCGT GCTCGACGGC GAGCCAGGTC CGTGGGTCCC GGCCGGCGTA
CGCGTGCTCC CGCAACGGCC CGGCGGCCTC GACCGCAGGA TCGCCCACGC GTTCGACGAC
GTCCTGCGCA CCTGCGCATC GCCCGCCCTC CTCGTCGGCA TGGACACCCC TCAGCTCGGC
ACCGTCCTGC GCGACGTCGA CTTCGCCGGT CACGACGCCG TGCTCGGCCT GGCGGCCGAC
GGCGGCTTCT GGGCCGTCGG CCTGCGCGAG GCCGACCCGG ACCTGTTCCT CGGGGTCGAG
ATGTCGACGG AGCGCACGGG TGCCGAGCAG CTGGACCGGC TGCGCGCGGC GGGGTTGCGG
GTCGCCCTGC TGCCCCCGCT GCGCGACGTC GACGTCCCCG ACGACGCGAC CGACGTCGCG
CGGGCCGCTC CGGGCACCCG TTTCGCCCGG ACGTGGCGGG CGCTGACGGG CACGGCGGAT
CACCGGGTGG GGCACTCGGA CGACGAGGTC GAGGCAGGGC CGTGGACATC GCACCGGTGA
 
Protein sequence
MPAAPRVDVI LPCLDEAAGL AWLLPRLPAD ARAIVVDNGS TDASCVVARA HGALVVHELR 
RGYGAARHAG LLAASADVVA FCDADGSLDP ADLARVTRPV LDGEADLVVG RRIPARGAWP
WHLRLANREL ARRVRRRTGV RLLDVGPLRA ARRVPFLDLG LQDRRSGYPV ETVVAAAAAG
WRVREVPVRY RPRSGRSKVT GTPLGAWRAV RDMTRILRTP PARASAGGAV EPPRTTIVLA
KAPVPGRAKT RLIGAFSPDD AAQLAAAALA DTLDAVLASG VEHCVLVLDG EPGPWVPAGV
RVLPQRPGGL DRRIAHAFDD VLRTCASPAL LVGMDTPQLG TVLRDVDFAG HDAVLGLAAD
GGFWAVGLRE ADPDLFLGVE MSTERTGAEQ LDRLRAAGLR VALLPPLRDV DVPDDATDVA
RAAPGTRFAR TWRALTGTAD HRVGHSDDEV EAGPWTSHR