Gene Bcav_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3089 
Symbol 
ID7858549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3444623 
End bp3445681 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content76% 
IMG OID643867186 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002883095 
Protein GI229821569 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.227922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGAG ACGTGCGCAT CCTCCTCACC GGCGGCCTCG GCTTCATCGG CTCGCCCACC 
CGGCGAGCCC TCGTCGCCGC GGGGCACGAC ATCGTCGTCC TCGATCGGGC CGACACGGCG
GATCGGAAGG GCCGGACGGG CCGGACGGAG CCTGCCCCGC CACCGGTCCC GGACGGGGTC
GAGGTGATCC GAGCGGACGT GCGCGACCTC CCCGCCGTCC GCGCCGCGAC GACGCACGCC
GACGCCGTCG TCCACCTCGC CGCCAAGGTC GGGCTCGGCG TGAGCCTCGC CGACCTCGAC
GACTACGTCT CCGTGAACGA CCTCGGGACC GCCGTCGTGC TGCGGGCGGC CGCGGAGGCC
GGTGTGGGCG ACGTCGTGCT CGCCAGCTCG ATGGTCGTCT ACGGGGAGGG TCGGTACACG
TGCACGAGCG ACGGCGTCGT CGCGCCGCTT CCCCGCCGCG CCGCCGACCT GGAGGCGGGC
GAGTTCGAGC CCCGGTGCCC GCACTGCGGC GGAACGCTCG AGCCGGGTCT CGTCACCGAG
GACGCCGCGC TCGACCCCCG CAACGTGTAC GCCGCGACCA AGGTGCACGA CGAGCACCTC
CTCGCCGTCT GGGCGCGCGA GACGGGTGCG CGGGCCACGG CGCTGCGCTT CCACAACGTG
TACGGACCCG GCATGCCGGC CGACACCCCG TACGCCGGCG TCGCGTCGAT CTTCGCGTCC
GAGCTGGCCG CCGGGCGCCC GCCGCGGGTG ACGGAGGACG GTGCCCAGCG GCGCGACTTC
GTCCACGTGG ACGACGTCGC GGACGCGGTC GTGGCCACGC TCTCTCGCCC CGGCACGCCC
GGGACGCTCC GGGCCCTCAA CGTCGGCTCC GGCCGGGTCA CGACCGTCGG CGAGCTCGCC
GCAGCGCTCG CGGACGCGCG CGGCGGTCCT CGCCCCGTCG TCACGGGCTC CTACCGGCTC
GGCGACGTGC GGCACGTCGC CGCGTCCAGC GAGCGCGCGG CGCGGGAGCT CGGCTGGCGT
GCGCGGATCG CCCTGGCCGA CGGCGTGGCC GACCTCTGA
 
Protein sequence
MLGDVRILLT GGLGFIGSPT RRALVAAGHD IVVLDRADTA DRKGRTGRTE PAPPPVPDGV 
EVIRADVRDL PAVRAATTHA DAVVHLAAKV GLGVSLADLD DYVSVNDLGT AVVLRAAAEA
GVGDVVLASS MVVYGEGRYT CTSDGVVAPL PRRAADLEAG EFEPRCPHCG GTLEPGLVTE
DAALDPRNVY AATKVHDEHL LAVWARETGA RATALRFHNV YGPGMPADTP YAGVASIFAS
ELAAGRPPRV TEDGAQRRDF VHVDDVADAV VATLSRPGTP GTLRALNVGS GRVTTVGELA
AALADARGGP RPVVTGSYRL GDVRHVAASS ERAARELGWR ARIALADGVA DL