| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3080 |
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| Symbol | |
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| ID | 7858540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 3434465 |
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| End bp | 3436798 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643867177 |
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| Product | Arabinogalactan endo-1,4-beta-galactosidase |
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| Protein accession | YP_002883086 |
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| Protein GI | 229821560 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3867] Arabinogalactan endo-1,4-beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.211646 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCC CGGCCCAGGC GGCGTCGGCG CACCGCGACC CGCGGCCCGT CGAGGCGGGG
ATCGTCGTCG AGCGGGTCGA GGGCATGCCG GAGGACTTCG TCAACGGCGT CGACGTCTCC
TCCGTCCTGT CGCTCGAGGA GAGCGGTGTC ACCTTCCGCG ACCGCCGCGG CCGACCCGCC
GACCTCTTCG AGGTGCTGGC GGACGCCGAC GTCACGCACG TGCGGATCCG GGTCTGGAAC
GACCCGTTCG ACGCGGAGGG GCACGGGTAC GGCGGCGGGA ACGTCGACGT CGCCCGGGCC
GTGGAGATCG GCCGGCGGGC GACGGCGGAG GGCCTGAGCG TGCTCGTCGA CTTCCACTAC
TCCGACTTCT GGGCCGATCC CGGGAAGCAG CAGTCGCCCA AGGCCTGGGA AGGGCTGGCC
ATCGAGGCCC GGGCTGCGGC CGCCGGCGAG TTCACCACGA GCGCCCTGAC AGCCTTCCGC
GACGGCGGCG TCGACGTCGG GATGGTCCAG GTCGGCAACG AGACGAACAA CGGCGTCGCC
GGCGTGACCG CCTTCGCGGA CATGGCGCAG ATCTTCAGCG CGGGCAGCGC GGCGGTCCGG
ACGGTGTTTC CGGACGCGCT CGTGGCCGTG CACTTCACGA ACCCCGAGAC CGCGGGTCGC
TACGCCGGCT ACGCCGCCGA GCTCGAGCGG TACGGCGTGG ACTACGACGT GTTCGCGAGC
TCGTACTACC CGTTCTGGCA CGGGACGCTC GAGAACCTCA CGTCGGTGCT GTCGCAGGTC
GCGACCACCT ACGACAAGAA GGTCATGGTG GCCGAGACGT CCTGGAACTC GACGTTCGAC
GACGGCGACG GTCACCCGAA CACGATCACG TCGTCGTCGG GCTTCACGCA GTACCCGGCG
AGCGTGCAGG GCCAGGCCAT GGCGGTGCGG GACGTGATCG AGGCGGTCGT GAACGTCGGC
GACGCCGGGA TCGGTGTCTT CTACTGGGAA CCGGCGTGGC TGCCGGTCGG CCCGCCCGAG
GAGGTCGAGC AGAACCGCCT GCTGTGGGAG CGGGACGGCT CCGGCTGGGC GACGAGCTAC
GCCGGTGAGT ATGACCCGGA GGACGCCGGC GTCTGGTTCG GTGGCTCGTC CTGGGACAAC
CAGGCGCTGT TCGACTTCTC GGGTCGGCCG CTGGAGTCGC TCATGGTCTT CGCTTACGCC
CGCACCGGGG CGACGGCGCC GCGGGCGGTG ATCGCCGTCG AGCAGGTGGA GGTGGTGGTC
ACCGAACGTG AGCCGATCGT GCTGCCTGAC GCCGTGGAGG TCACCTACAA CGACCGGTCC
GTCGAGACCC AGGCCGTCAC ATGGAGCGAC GCGGTGGACT GGATCCGCGG GCCGGGTGAA
TACCGCATCA CCGGGCTCAC CGGTGCCGGG GTGCTCGCCG AGGCGAGCGT GACCGTCCAG
GCGGTGAACC ACGTGCGCAA CCCCGGCTTC GAGGATCCTG ACCTCAGCAT GTGGGTGATC
ACCGGCGAGG GCGCCGAGGT GGCCGACGAT CCCGATGCGT TCGAGGGGTC GCGGGCGCTC
AAGTTCTGGG CCGCCACCGA CTACTCGTTC GCGATCAGCC AACGTCTCGA GGGAGTTCCG
GCCGGCACCT ACGCGCTCTC GGCCACGACG CAGGGCGACG ACGCCGGGGA GACCGACTCC
ATGCTCCTGA GCGCGAGCAC GGCCGCGGGG GAGGTCAGCG CGCCGCTCGA GCTCGCCGGC
TGGCGGAACT GGAGCACCGC GACGATCGAT GAGGTCGTCG TCGGCGACGA CGGCGTGGTG
ACGGTGAGCG CGGCCTTCAC GGTGCAGGGT GGTGCGTGGG GCAACGTCGA CGCCGTCACG
CTGTCGCAGG TCGACCGGAC CGAGATCGAC ACCACGGCGC TCGAGGCCGC GCTCGCCGAG
GCATGGGCCG TCGACCGCAG CCTGTACACC GCGGAGTCGC TCCGGGTCCT CGACGACGCC
GTCGAGAAGG CGGAGGTCGT CCTCGCCGGG AGCCGGGCCG AGCAGGCGGA CGCCGATGCG
GCGACGTCGC TCCTCGTCGA GGCGTTGGCC GGCCTCGAGC CCGCCGACGA CGGGCCCGGC
CGGCCGTGCC GCCCGGGTGG CGGTGGGCCG GGGCACCCCG GGCATCCCGG CGGACCCGGG
CACCCCGGGC ACCCCGGGCA CCCCGGACAC CCCGGACACC CCGGACACCC CGGACACCCC
GGCGGACCCG GACACGCTGG TCATCCGGGC GGAAGTGACG TCGAGCACCG AGGCGGCCCC
GGCCATCCCG GAGGCCCCGG AGGCCCCGGC GGCCCTGGCC GCCCCTGCCG GTAG
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| Protein sequence | MILPAQAASA HRDPRPVEAG IVVERVEGMP EDFVNGVDVS SVLSLEESGV TFRDRRGRPA
DLFEVLADAD VTHVRIRVWN DPFDAEGHGY GGGNVDVARA VEIGRRATAE GLSVLVDFHY
SDFWADPGKQ QSPKAWEGLA IEARAAAAGE FTTSALTAFR DGGVDVGMVQ VGNETNNGVA
GVTAFADMAQ IFSAGSAAVR TVFPDALVAV HFTNPETAGR YAGYAAELER YGVDYDVFAS
SYYPFWHGTL ENLTSVLSQV ATTYDKKVMV AETSWNSTFD DGDGHPNTIT SSSGFTQYPA
SVQGQAMAVR DVIEAVVNVG DAGIGVFYWE PAWLPVGPPE EVEQNRLLWE RDGSGWATSY
AGEYDPEDAG VWFGGSSWDN QALFDFSGRP LESLMVFAYA RTGATAPRAV IAVEQVEVVV
TEREPIVLPD AVEVTYNDRS VETQAVTWSD AVDWIRGPGE YRITGLTGAG VLAEASVTVQ
AVNHVRNPGF EDPDLSMWVI TGEGAEVADD PDAFEGSRAL KFWAATDYSF AISQRLEGVP
AGTYALSATT QGDDAGETDS MLLSASTAAG EVSAPLELAG WRNWSTATID EVVVGDDGVV
TVSAAFTVQG GAWGNVDAVT LSQVDRTEID TTALEAALAE AWAVDRSLYT AESLRVLDDA
VEKAEVVLAG SRAEQADADA ATSLLVEALA GLEPADDGPG RPCRPGGGGP GHPGHPGGPG
HPGHPGHPGH PGHPGHPGHP GGPGHAGHPG GSDVEHRGGP GHPGGPGGPG GPGRPCR
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