Gene Bcav_3079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3079 
Symbol 
ID7858539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3433477 
End bp3434385 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content68% 
IMG OID643867176 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002883085 
Protein GI229821559 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3833] ABC-type maltose transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.43285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.940985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCC CGGTCACAGT TCCCGCGCAG ACGGCGGCGC CCCGGCGCCG GCGCACCCGC 
GAGCGCCGGT CCCGATGGCT CCGGGAGGTC GGGTGGAAGT ACCCGTTCGC CGCCGTCGTG
GTCTTCTACG CGGCCTTCCC GCTGGTGTAC GTGCTCTCGG CGGCACTGGC CACGACAGGG
ACGCTCACCG GCTCGACGTC GCTGTTCACG TCGATCTCCA CCGCCAACTT CGAGGCGCTG
GGCGGCACGC TGTTCTGGGT CTGGGCCGTG AACTCCGTCG TGATCGGCCT GGCGACGGCG
ATCGGCTCGG TGCTCATGGG GGCGACGGCG GCGTACGCCT TCTCGCGATT CAGCTTCCGC
GGCCGACGAG GCGGACTGAC CGCGCTCCTG ATCGCGCAGA TGTTCCCGCA GATGCTGGCG
TTCGTGGCGA TCTTCCTGCT GCTCATCGCG CTCGGGAACG TGGCGCCCGT CCTCGGTCTC
GACAGCAAGA TCGCGCTGAT CTGCGTCTAC CTCGGCGGCG CGCTCGGCAC GAACACGTTC
CTCATGTACG GCTTCTTCAA CACGGTGCCG AAGGAGCTGG ACGAGGCAGC GAAGATCGAC
GGCGCCACCC ACGCGCAGAT CTACTGGACG ATCATCCTCC GCCTCGTCAC GCCGATCCTC
GCTGTCGTCG GGCTCCTGAG CTTCATCGGG ACGTTCGGCG ACTTCATCCT GGCCCGCATC
ATCCTCACGT CGCAGTCCAA CTGGACGCTC GCCGTCGGGA TGTACACGTG GGTGTCCTCG
CAGCTCAACG CGAACTGGGG CCTGTTCGCG GCCGGGTCCG TGATCGCGAG CATCCCGGTG
CTGCTGCTGT TCCTGGGCCT GCAGAAGTAC ATCGTGGGCG GCCTGACCGC GGGCTCCGTG
AAGGGCTGA
 
Protein sequence
MAGPVTVPAQ TAAPRRRRTR ERRSRWLREV GWKYPFAAVV VFYAAFPLVY VLSAALATTG 
TLTGSTSLFT SISTANFEAL GGTLFWVWAV NSVVIGLATA IGSVLMGATA AYAFSRFSFR
GRRGGLTALL IAQMFPQMLA FVAIFLLLIA LGNVAPVLGL DSKIALICVY LGGALGTNTF
LMYGFFNTVP KELDEAAKID GATHAQIYWT IILRLVTPIL AVVGLLSFIG TFGDFILARI
ILTSQSNWTL AVGMYTWVSS QLNANWGLFA AGSVIASIPV LLLFLGLQKY IVGGLTAGSV
KG