Gene Bcav_3071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3071 
Symbol 
ID7858531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3423135 
End bp3423803 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content78% 
IMG OID643867168 
Productpeptidase M22 glycoprotease 
Protein accessionYP_002883077 
Protein GI229821551 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.255887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.552992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGGCA TCGACACCTC CGGCGGGACG TCCGTCGCCC TCGTCGACGC CGCGGCGGGC 
TGGACGCAGC TGGGTGTCGC TGGCTCCCCG GACCCGCGCG GCCACGCCGA GGTCCTCACG
CCCCTGATCT CCGAGGTGCT CGACGCCGCG GGGCTGAGCG CTCCCGACCT CGCCGGCATC
GCCGTCGGCA CCGGCCCGGC TCCCTTCACG GGCCTGCGGG TCGGGATCGT CACCGCGCGG
ATGCTCGGCC GGGCGGCCGG CGTCGAGGTC TGGGGCGTGC CGAGCCTGGA CGTGTGGGCG
CGCGCCTGGT TCGACGGCGA GGGCAGGGCT GCCGACGGCG CCGTGCGCGT GGTGGCCGAT
GCTCGCCGGC GCGAGGTCTA CACCGCTCGC TACGTGCGCG ACGGCGACGG CGCCGTCGTC
CGGACCGACG GGCCCGACGT CGTCGCACCC GACCGGCTCA CGCTCGCCGA GCCGTGCGTC
GGCCCGGCGA CCGGCCTCTA CCCGGACGCG CTGCCGACGG TCCCCGGAGC GCCGGAGGAG
TTCGACGCGG CCCTCCTCGC CCGGATCGGC GCCGAGCGCG CCGCCGCCGG CGACGACGTC
GCGCTCACGC CGCTGTACCT GCGCCGTCCC GACGTCGCGC CCCGGGCGCC GCGCAAGAGG
GCCTCGTGA
 
Protein sequence
MLGIDTSGGT SVALVDAAAG WTQLGVAGSP DPRGHAEVLT PLISEVLDAA GLSAPDLAGI 
AVGTGPAPFT GLRVGIVTAR MLGRAAGVEV WGVPSLDVWA RAWFDGEGRA ADGAVRVVAD
ARRREVYTAR YVRDGDGAVV RTDGPDVVAP DRLTLAEPCV GPATGLYPDA LPTVPGAPEE
FDAALLARIG AERAAAGDDV ALTPLYLRRP DVAPRAPRKR AS