Gene Bcav_3062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3062 
Symbol 
ID7858522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3416246 
End bp3417187 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content76% 
IMG OID643867159 
ProductHelix-turn-helix type 11 domain protein 
Protein accessionYP_002883068 
Protein GI229821542 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.408718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.752018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCG ACCGTCTCGT CGCCGCCCTC CTGCTCATGC AGACCCGGGG GCGGATCACG 
GCCGCCCAGC TGGCCGACGA GCTCGAGGTG TCGGTGGCCA CCGCTCGCCG CGACCTCGAG
GCGCTGTCGA CAGCGGGAGT TCCCGTCTAC CCGCAACCGG GTCGTGGCGG CGGGTGGCAG
CTCGTGGGCG GGGCGCGCAC GGACCTCACG GGACTGACGT CGTCCGAGGC GCGGGCGCTC
TTCTTGCTCG CGGGCCCGGC GGCGTCCCGC GACCCGGGTG CGCGGTCGGC CCTGCGCAAG
CTCGTGGGGG CGCTGCCCGC ACCGTTCCGG GCCGACGCCG AAGCGGCCGC GGCCGCCGTC
GTCGTCGACA CCGCGGGGTG GGGAGAGCGC AGCCGCACCC GCCCGCCGCT CGTCGACACG
CTCCAGGACG CCGTCGTCCG ACGGCGCAAG GTCACGCTGG ACTACGTCAG CCCCGGGCGC
GGGCGCAGCC GGCGGCTGGT CGACCCCTGG GGCCTCGTCG ACAAGGACGA CGTCTGGTAC
CTCGTGGCCG GCACGGACAA GGGTCGGCGG ACGTTCCGCG TCGACCGGAT CGCCGGCGTG
ACGCTGAGCG AGGAGGCGGC GGAGCGCCCG GCGGAGCTCG AGCTGGAGCG GGTCTGGGAG
AGCGTCGTGG CCGAGATGGA GGAGCGCCGC TCCCTCGTCC CCGCGACGGT CCTCACCGAC
GCGCGGTTGC TGCCGGTGCT GCGGGACCGC TTCGGCCGGC ACTGCGAACA GCTGGAGGAG
CTCGACGGCG GGCGGGTCCG TGTCCGGGTC GCCGCACACC TCCCGGTCGG GGTGGCCCAG
GAGCTCGCCG GGTTCGGTGG GGCGGTCGAC GTCGTCGAAC CCGAGGAGGT GCGCGCGGAG
CTCGCCCGCC TCGGGGCGGA GCTCCTCGAG CGCTACGGGT AG
 
Protein sequence
MRADRLVAAL LLMQTRGRIT AAQLADELEV SVATARRDLE ALSTAGVPVY PQPGRGGGWQ 
LVGGARTDLT GLTSSEARAL FLLAGPAASR DPGARSALRK LVGALPAPFR ADAEAAAAAV
VVDTAGWGER SRTRPPLVDT LQDAVVRRRK VTLDYVSPGR GRSRRLVDPW GLVDKDDVWY
LVAGTDKGRR TFRVDRIAGV TLSEEAAERP AELELERVWE SVVAEMEERR SLVPATVLTD
ARLLPVLRDR FGRHCEQLEE LDGGRVRVRV AAHLPVGVAQ ELAGFGGAVD VVEPEEVRAE
LARLGAELLE RYG