Gene Bcav_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3056 
Symbol 
ID7858516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3410642 
End bp3411676 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content77% 
IMG OID643867153 
Producttranscriptional regulator, MerR family 
Protein accessionYP_002883062 
Protein GI229821536 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.247137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCGG TGGAGGCACC GACGCACCCG GGCGAGCGAG GCGGGCGGCC AGACCTCACT 
GCCGGGGCGG ATGCGCCCCT CACGGTCGCT GCCGTCGCGG CTCGGCTCGG CGTCGCGGCG
TCGACCCTGC GCACCTGGGA CCGCCGCTAC GGACTCGGCC CGTCCCGCCG GGAGGCGGGC
AGCCACCGGC GGTACACCCC GGACGACGTC GCCCGGCTCG AGACCATGCG CGCGCTGACG
CTGCGCGGCG TCGCGCCCGC CGACGCGGCA CGTATCGCCT CGCAGAGCGC GCCGTCGTCG
CTGGTGCATC AACCGAGCGG AGGAGACCTG CTCGACCCTC TCTCGCTCGC GGCGGCGGCG
ATCGAGTCGG ACGAGCTGCG GTTGCGGCGC GTCCTGCTCC GGGCCGCCCG GACGAACGGG
ATGGTGGCGG CGTTCTCCGA GCTGGTCGAA CCCGCGGTCG ACATCCTCGC CCGCCGCGAC
CGCGCCGACG CTCCCGGGCG TGCGCCCGAG GCCGTGCTCG CCGCGGCCGT GCTCGCCGTC
GCGCGCGAGC TCACCACCAC CCCACCCGCG TCCGACGCGC CACGGGTGCT GCTGTACGCC
CGCGCCGCGG ACACCCTCGC GGCACACTCG CTCGCCACCG GCCTGGCGAC GATCGGCGCC
CGCTGCCGCA TCCTGCGGCC GAACCGGGCG GAGGAGAGCG CGCGCCGCGC CGTCGACGCC
GTGGCATCGG CGGACCCGGA CGTGCTCGTC GTGCTCGGGC GCGCCCCCGG GGCGGAGAGC
CTCGTGGCCG ACGTCCACGC GGAGGGTCTC GCGCAGGTGG TCTGCGTCGG TCCGCGATCG
CCGGACATCT GGCTTCCGGG GGTCCACCGC GTGCGGACGC TGGCTGCGGC GGTGCACGAG
ATCGGCGATC TGCTGGTCGC CTCCCAGCGG GGCGCGGAGG CCTCGAAACG GCCGGGCGTC
CCCGCCTCCG ACGGCGGCGT TGACGGTGGT GCCGCCCGCC CCGCCGGGAC GGCACCCGGA
GCCGACGTAG ACTGA
 
Protein sequence
MKPVEAPTHP GERGGRPDLT AGADAPLTVA AVAARLGVAA STLRTWDRRY GLGPSRREAG 
SHRRYTPDDV ARLETMRALT LRGVAPADAA RIASQSAPSS LVHQPSGGDL LDPLSLAAAA
IESDELRLRR VLLRAARTNG MVAAFSELVE PAVDILARRD RADAPGRAPE AVLAAAVLAV
ARELTTTPPA SDAPRVLLYA RAADTLAAHS LATGLATIGA RCRILRPNRA EESARRAVDA
VASADPDVLV VLGRAPGAES LVADVHAEGL AQVVCVGPRS PDIWLPGVHR VRTLAAAVHE
IGDLLVASQR GAEASKRPGV PASDGGVDGG AARPAGTAPG ADVD