Gene Bcav_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3053 
Symbol 
ID7858513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3407019 
End bp3408143 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content74% 
IMG OID643867150 
Productinosine 5-monophosphate dehydrogenase 
Protein accessionYP_002883059 
Protein GI229821533 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0516] IMP dehydrogenase/GMP reductase 
TIGRFAM ID[TIGR01304] IMP dehydrogenase family protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.21265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAACG AGATCGAGAT CGGCCGGGGC AAGCGCGGCC GCCGGGCGTA CTCCTTCGAC 
GACATCGCCG TCGTCCCGAG CCGTCGCACC CGCGATCCCG AGGACGTGTC CGTCGGCTGG
CAGATCGATG CCTACCACGT CGACCTGCCC CTCCTGGCCG CGCCGATGGA CTCCGTCATG
AGCCCCGCGA CGGCGATCCG CCTCGGTGAG CTCGGCGGCA TCGGCGTGCT CGACCTCGAG
GGTGTGTGGA CCCGGTACGA GGACCCGGAG CCCCTCCTCG AGGAGATCGC GAACCTCCCC
GCGGGCGATG CCACGCGGCG CATGCAGGAG ATCTACGCCG CGCCGGTCAT CCCCGAGCTC
ATCACCGAGC GGCTCGGCGA GATCCGCCGC GGCGGGGTGA CGGTGGCCGG CGCCCTCTCG
CCGCAGCGCA CGCAGCAGCT GTGGCGCGCG GTGGTGGCGG CCGGCGTCGA CCTCTTCGTC
ATCAGGGGCA CCACCGTGTC CGCCGAGCAC GTCTCCAGCG CGGCGGAGCC GCTCAACCTC
AAGCGCTTCA TCTACGAGCT CGACGTCCCG GTGATCGTCG GCGGCGCAGC CACGTACACG
GCCGCGCTCC ACCTCATGCG CACGGGCGCC GCGGGCGTCC TCGTCGGGTT CGGCGGCGGG
GCCGCGCACA CGACCCGCGT GAGCCTCGGC ATCCACGCCC CCATGGCGAG CGCCGTCGCC
GACGTCGCAG CGGCCCGGCG GGACTACCTC GACGAGTCCG GTGGCCGGTA CGTGCACGTG
ATCGCCGACG GCGGCGTCGG TCGCAGCGGC GACCTCGTCA AGGCGGTGGC GTGCGGCGCC
GACGCCGTCA TGCTCGGTGC GGCGCTGGCG CGCGGCGTCG AGGCGCCCGG CAAGGGCTGG
CACTGGGGGA GCGAGGCGCA CCACCCGGAG CTGCCCCGCG GCGAGCGCGT GCGGGTCGGC
ACGGTCGGCA CGCTGGAGGA GATCCTGCAC GGCCCGGGTG GGCGCGCCGA CGGCACGCTC
AACCTCGTGG GCGCGCTGCG GCGCGCGATG GCGACCACCG GCTACTCCGA CGTCAAGGAG
TTCCAGCGCG TCGAGGTCGT CGTCTCGCCG TACACCCCGC GGTGA
 
Protein sequence
MTNEIEIGRG KRGRRAYSFD DIAVVPSRRT RDPEDVSVGW QIDAYHVDLP LLAAPMDSVM 
SPATAIRLGE LGGIGVLDLE GVWTRYEDPE PLLEEIANLP AGDATRRMQE IYAAPVIPEL
ITERLGEIRR GGVTVAGALS PQRTQQLWRA VVAAGVDLFV IRGTTVSAEH VSSAAEPLNL
KRFIYELDVP VIVGGAATYT AALHLMRTGA AGVLVGFGGG AAHTTRVSLG IHAPMASAVA
DVAAARRDYL DESGGRYVHV IADGGVGRSG DLVKAVACGA DAVMLGAALA RGVEAPGKGW
HWGSEAHHPE LPRGERVRVG TVGTLEEILH GPGGRADGTL NLVGALRRAM ATTGYSDVKE
FQRVEVVVSP YTPR