Gene Bcav_3032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3032 
Symbol 
ID7860143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3381598 
End bp3382035 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content72% 
IMG OID643867129 
Product3-dehydroquinate dehydratase 
Protein accessionYP_002883038 
Protein GI229821512 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.225268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000680386 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAGCGAC GCGACGTGAT GGTGCTGAAC GGGCCGAACC TCAACCGGTT GGGTGTGCGG 
CAGCCGGAGA TCTACGGCAC CGCGACGCTC GCCGACCTGG CGCGCTTCTG CCGGGAGTGG
GGCGACGCGC TGGGTCTGAC GGTGCGCTTC GAGCAGACGA ACCACGAGGG GGTCATGGTC
GACCTGCTCA ACGAGGCGGC CGACGGCGCG CTGCCCGTCG TCCTGAACGC GGCGGCCTGG
ACGCACTACT CGTACGCGAT CGCTGACGCG TGCGCTCAGC TGGTCGCGCC GCTCGTCGAG
GTGCACCTGT CCGACCCCTC GTCGCGCCCG GAGGTGTGGC GGCACACGTC GGTCGTGACG
CCGTACGCCT CGAGCGTGAT CGCGGGTCGC GGCTTCGACG GGTACCGGCT CGCGCTCGAG
CACCTCGCCG GCGCCTGA
 
Protein sequence
MQRRDVMVLN GPNLNRLGVR QPEIYGTATL ADLARFCREW GDALGLTVRF EQTNHEGVMV 
DLLNEAADGA LPVVLNAAAW THYSYAIADA CAQLVAPLVE VHLSDPSSRP EVWRHTSVVT
PYASSVIAGR GFDGYRLALE HLAGA