Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3032 |
Symbol | |
ID | 7860143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 3381598 |
End bp | 3382035 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643867129 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_002883038 |
Protein GI | 229821512 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.225268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000680386 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCAGCGAC GCGACGTGAT GGTGCTGAAC GGGCCGAACC TCAACCGGTT GGGTGTGCGG CAGCCGGAGA TCTACGGCAC CGCGACGCTC GCCGACCTGG CGCGCTTCTG CCGGGAGTGG GGCGACGCGC TGGGTCTGAC GGTGCGCTTC GAGCAGACGA ACCACGAGGG GGTCATGGTC GACCTGCTCA ACGAGGCGGC CGACGGCGCG CTGCCCGTCG TCCTGAACGC GGCGGCCTGG ACGCACTACT CGTACGCGAT CGCTGACGCG TGCGCTCAGC TGGTCGCGCC GCTCGTCGAG GTGCACCTGT CCGACCCCTC GTCGCGCCCG GAGGTGTGGC GGCACACGTC GGTCGTGACG CCGTACGCCT CGAGCGTGAT CGCGGGTCGC GGCTTCGACG GGTACCGGCT CGCGCTCGAG CACCTCGCCG GCGCCTGA
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Protein sequence | MQRRDVMVLN GPNLNRLGVR QPEIYGTATL ADLARFCREW GDALGLTVRF EQTNHEGVMV DLLNEAADGA LPVVLNAAAW THYSYAIADA CAQLVAPLVE VHLSDPSSRP EVWRHTSVVT PYASSVIAGR GFDGYRLALE HLAGA
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