Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3025 |
Symbol | |
ID | 7860136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3373180 |
End bp | 3374076 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643867122 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002883031 |
Protein GI | 229821505 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.967361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00254497 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGTGCGC GCTGCCAGAT CCTCGCGGAG CTCTACGACG AGGCGCGGCC GCGGCTGGTC GGCGTGGCCT ACGCGATCCT CGGGAGCTAC GCCGAGGCCG AAGACATCGT CTCGGAGTGC TGGATGCGGC TCGTGGAGGC GGACGCGGGT CAGCCGGTGC TGGACGTCGA GGGGTGGTCG ATCGTCGCGG TGTCGCGCGC GGCGATCGAC GTCCTGCGGT CCGCTCACCA TCGCCGCGAG TCGTATCCCG GTTCCTGGTT GCCGGAGCCG GTGGTCGATG CGGCGGACCC GGACCCTGCG GACCGGGTGA CGCTCGACGA TCGCCTCCGC TACGCGCTCC TCGTCGTCCT CGAGTCGCTC TCGCCGGCCG AGCGGACGGC GTGGGTGCTG CACGACCTGT TCGAGCTGAC GTTCGCGGAC GTCGCTCGGG TCGTCGGTCG ATCGCCGGCG GCCGTGCGGC AGCTCGCAGC CCGCGCACGC CGGCACGTGG CCGAGCGTGC TCCGCGGTTC GACATCGCCC CGGCGGAGCA CCGTGCGGTG GTGGAGCGGT TCCTCGCGGC CGCGACGGGC GGCAGCCTCG CCGATCTCGT CAGATACCTC GACCCCGACG TCGTGCTGAC CAGTGACGGC GGCGGGGAGG TCAGCGCGGT CCGGCGCCCC GTCGTCGGCG CGGATCGGGT CGCCCGGTTC CTGGTGGGGA TCGCCGGGCG GGTCCGACCC GACGAACGCG TCGTCGTCGT CTCGGTCAAC GGAGCGCCCG GTCTGGCCGT GTTCCGCGCC GCCGCGCTCA CGGACGTCAT CGCGCTCACG GTCTCCGGTG GGCTCGTCTC GCGGGTCGAC TTCGTACGAG CGCCGGCGAA GCTCGAGCGC GCCTGGCGCA GCGGAGCGGC ATCATGA
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Protein sequence | MSARCQILAE LYDEARPRLV GVAYAILGSY AEAEDIVSEC WMRLVEADAG QPVLDVEGWS IVAVSRAAID VLRSAHHRRE SYPGSWLPEP VVDAADPDPA DRVTLDDRLR YALLVVLESL SPAERTAWVL HDLFELTFAD VARVVGRSPA AVRQLAARAR RHVAERAPRF DIAPAEHRAV VERFLAAATG GSLADLVRYL DPDVVLTSDG GGEVSAVRRP VVGADRVARF LVGIAGRVRP DERVVVVSVN GAPGLAVFRA AALTDVIALT VSGGLVSRVD FVRAPAKLER AWRSGAAS
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