| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3012 |
|---|
| Symbol | |
|---|
| ID | 7860123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3361357 |
|---|
| End bp | 3362262 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643867110 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_002883019 |
|---|
| Protein GI | 229821493 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.015622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00745042 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCG CTCGCGAGCT GACGGCGACG TCCGGCGACG TCACGCTCGC CGGCAGCCTG
TGGCTCCCGG ACGGCGACCC GGGCGCGCTC GTGCTGATGC ACCCGGGGTC CGGGCCGTCG
GACCGGCACA ACGACGTCTT CTTCCCGCCG ATCCGGGCCG CCCTGCTCGC GGCGGGCGCC
GCCGTCTGCT CCTACGACAA GCGTGGCGTC GGCGGCTCCG GGGGAGACTG GCTCACCGCC
GGCATCCCGG AGCAGGCGGA CGACGTCGTC GCGGGTCTCG CGGCCGCGCG GCCCCACGTG
GGCGGTGTGC CCGTGATCCT GTTCGGGCAC AGCCAGGGCG GGTGGGTGGT GCTCGCCGCG
GCCGGTGCCG CGGGCGCGGA CGCCGTCGTC ACGAGCTCCG GACCCGGGGT GAGTCCCGGC
GTGCAGGAGC GTCACGCGAC GCGCCGCCAC CTGGGGGACG CCCCGCACGC CGCCGCCGAC
GCCGCCCTTT TCGACGAGCT CATGGATCTC GCCTCGGCCG GTGCGTCGGC GAGCGAGGCG
CGCGCGTGGC TGGAGCAGCC CGATCGCGCG CCGGGGCTCG ACCGGCTGCG TGCGCTCGGG
GCGTTCGTGC CCGACGGCGA CGACCTGTGG GGGCTCGCGG TGCGGCTCGT CGACGCCGAC
CCGGCGCCCG ACCTCCGCGC GCTGCGGGTG CCGCTGCTCG CCGTCTTCGG CGCCCAGGAC
CCGGCCGTCC CCGTGCAGCG CAGCCTCGAG GTGCTGCGCG AGGAGGTACG CCCGGACCTG
CTCGACGTCG TCGTGCTGGA CGGCGGGCAC CGCCTGGAGC ACCCCGAGAC CGACGAGCTG
GCGCCCGACT ACGTGCCGAC GCTCGTCCGG TTCGTCGAGC ACGTCGCGCG GGCGGCCGGC
GGGTAG
|
|---|
| Protein sequence | MSPARELTAT SGDVTLAGSL WLPDGDPGAL VLMHPGSGPS DRHNDVFFPP IRAALLAAGA
AVCSYDKRGV GGSGGDWLTA GIPEQADDVV AGLAAARPHV GGVPVILFGH SQGGWVVLAA
AGAAGADAVV TSSGPGVSPG VQERHATRRH LGDAPHAAAD AALFDELMDL ASAGASASEA
RAWLEQPDRA PGLDRLRALG AFVPDGDDLW GLAVRLVDAD PAPDLRALRV PLLAVFGAQD
PAVPVQRSLE VLREEVRPDL LDVVVLDGGH RLEHPETDEL APDYVPTLVR FVEHVARAAG
G
|
|---|
| |