| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3008 |
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| Symbol | |
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| ID | 7860119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 3356565 |
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| End bp | 3357761 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643867106 |
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| Product | major intrinsic protein |
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| Protein accession | YP_002883015 |
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| Protein GI | 229821489 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.253442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0606624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACG CGACCACTCC GCGCCCGCTG AGCACCGACG CCGAGCTCCC TGACGAGCTC
GAGGATTACG ACGAGGAGTT CGTCGTCGAG GAGGCGCCCG CCTACGGGCT CGGCGCGAGG
CTCGGCGCGG AGGCCTTCGG CACGTTCGTG CTCGTCTTCA TCGGTGTCGG TGTCGCTCTC
TTCTCCGGAG TCAGCACCGG CGTCGGCGCG CTCGGCATCG GGCTCGCGTT CGGCATCGCC
GTCCTCGGCG CGGCGAGCGC CGTCGGCCAC ATCTCCGGCG GCCACTTCAA CCCGGCGGTC
ACGCTCGGGG CGGCGATCTC CGGTCGGACG TCCTGGGGCG ACCTCCTCCC CTACTGGCTG
GCGCAGCTCG TGGGCGGCGC GGTCGCGGCG GGCGTGCTGT TCGTCACCGT CCCGTCCGGC
CTGCCCGGCC TGTTCGCCCA GGACGGCACG GCGCGCGGCT TCTTCTCGGC GGTGAGCAAC
GGGTTCGGCG AGCACTCGCC CACCTACGCC CTCATCGCGT CCTCCGGGCA GATCCCCGCC
GAGCAGGCGA CGGCCGGCGC GTTCGGACTG CTGGGCGCCG CGGTCATCGA GATCGTCGGC
ACGGCGATCT TCGTCGGCGT GATCCTCGGC GTCACCGACG TGCGCAGCAA CGTGAAGTTC
GGCCCGGTCG CGATCGGCCT GACGCTGGCC GCCGTGCTCC TCGTGGCCAT CCCCGTCACG
AACGGCTCGA TCAACCCGGC GCGCTCCACG GCCACGGCGA TCTTCTCCGA GGGCTGGGCG
TTCGGGCAGC TGTGGCTGTT CTGGGTCGCC CCGCTGCTCG GCGCGGCGAT CGCCGGGCTC
GTCTACAGCG CGTTCGCCCC GGCGCCGGTC ACCGAGTACG CGTGGGCCGA GGACGGTGCC
GAGGAGGATG CGGTGGACGA CGCCGACGCG CTGGCCGAGG CCGAGACCGC TGTGCGTGAC
TCCGACGCCG CCGCGTCGAC CGCCCTCTTC GACGAGCCCG AGGAGCCGGA GGAGGGCGAG
GAGCCCGAAG AGGCCGACGT CGAGGTGATC GAGGTCGTCG AGGTCATCGA GGAGCCCGAC
GGCACGGAGA CGGTCGAGGT CACCGAGGTC GTCGCCGTCG AGGAGCCGGA GACGGGCGAG
GAGGCCGACA CGGACGAGGG CACCGACGGG AAGCCCGCGG GCGGCTCGAA GGCCTGA
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| Protein sequence | MADATTPRPL STDAELPDEL EDYDEEFVVE EAPAYGLGAR LGAEAFGTFV LVFIGVGVAL
FSGVSTGVGA LGIGLAFGIA VLGAASAVGH ISGGHFNPAV TLGAAISGRT SWGDLLPYWL
AQLVGGAVAA GVLFVTVPSG LPGLFAQDGT ARGFFSAVSN GFGEHSPTYA LIASSGQIPA
EQATAGAFGL LGAAVIEIVG TAIFVGVILG VTDVRSNVKF GPVAIGLTLA AVLLVAIPVT
NGSINPARST ATAIFSEGWA FGQLWLFWVA PLLGAAIAGL VYSAFAPAPV TEYAWAEDGA
EEDAVDDADA LAEAETAVRD SDAAASTALF DEPEEPEEGE EPEEADVEVI EVVEVIEEPD
GTETVEVTEV VAVEEPETGE EADTDEGTDG KPAGGSKA
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