| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2997 |
|---|
| Symbol | |
|---|
| ID | 7860108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3338641 |
|---|
| End bp | 3340200 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643867095 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002883004 |
|---|
| Protein GI | 229821478 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.746869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA CCATCCTCGA GATGCGTTCC ATCACGAAGA CGTTCCCGGG CGTCCGCGCG
CTCGACGACG TCTCCCTCAC CGTGCGGCGC GGCGAGATCC ACGCGATCTG CGGGGAGAAC
GGCGCCGGCA AGTCCACGCT GATGAAGGTG CTGTCGGGCG TGTACCCGCA CGGGGACTAC
GCGGGTCAGA TCGTGCTCGA CGGCGATGAG GTCGCCTTCG GCTCCATCAA CGACAGCGAG
GCGCGCGGCG TCGTCATCAT CCACCAGGAG CTGGCGCTGG TGCCGTACCT CTCCGTCGCC
GAGAACATCT TCCTCGGCAA CGAGCGGCGC GGGCCCGACC GCCTCATCGA CTGGAACCGC
ACGAACGCGG AGGCCGCGCA GCTGCTCGAG CAGGTGGGGC TGGACGAGAA CCCCACCGTG
CAGGTCGCCT CTCTCGGCGT CGGCAAGCAG CAGCTCATCG AGATCGCGAA GGCGCTGTCC
AAGCGGGTGC GGCTGCTCAT CCTCGACGAG CCGACAGCTG CCCTGAACGA CACGGACTCC
GAGCACCTCC TGGGCCTGCT CCGCCAGCTC CAGGCCCAGG GCATCACGTC GATCATGATC
TCCCACAAGC TCGCCGAGAT CGCCGAGATC GCGGACTCGA CGACAGTCAT CCGCGACGGG
CGCACGATCG AGACGCTCGA CATGGCGTCC CCGGAGGCCA CCCAGGCGCG CATCATCCGG
GGCATGGTCG GCCGGGACCT CGACCACCGG TTCCCGGAAC GCGTGCCGGC CATCGGCGAG
GAGGTGCTGC GGGTCGAGAA CTGGACGGTC CACCACCCCA CGCAGTCCGA CCGCGTGGTC
GTGTCCGACG CCAACCTCGT GGTGCACGCG GGCGAGGTCG TCGGGATCGC GGGCCTCATG
GGTGCGGGCC GCACGGAGCT CGCGATGAGC ATCTTCGGCC ACAGCTACGG CCGGGACATC
TCGGGCACCG TCCGGATGCG CGGTCGCGTC GTCTCGACCC GCACGGTCGA CGACGCCATC
GCGAACGGAC TCGCGTACGC CACCGAGGAC CGCAAGCGAT ACGGCCTCAA CCTCATCGAC
GACATCCGGC ACAACATCAC GGCCGCCGCA CTGGGCAAGG TGTCGCGGCG CGGGTGGGTC
AACGACAACG AGGAGCTCAA GGTCGCGGAG GAGTACCGCT CGAGCCTGAA CATCCGCACC
CCGAGCGTGC TCGCCGTCGT CGGCAAGCTG TCCGGCGGGA ACCAGCAGAA GGTCGTCCTG
TCGAAGTGGA TCTACACGGA CGCCGACGTC CTCATCCTCG ACGAGCCGAC CCGGGGCATC
GACGTCGGCG CCAAGTACGA GATCTACACG ATCGTCAACC GCATGGTCGC GGCGGGGAAG
GCCGTCGTCG TCATCTCGTC GGAGCTGCCC GAGCTCATGG GCATCTGCGA CCGCATCTAC
ACGCTCGCGT CCGGTCGGAT CACCGGTGAC GTCCCCGTGG CAGGGGCCAC GCAGGAACGG
CTCATGGAGC TCATGACCGC CGAACGCCGC ACCACGGAAA GGGACGTCCT CCAGAGATGA
|
|---|
| Protein sequence | MTDTILEMRS ITKTFPGVRA LDDVSLTVRR GEIHAICGEN GAGKSTLMKV LSGVYPHGDY
AGQIVLDGDE VAFGSINDSE ARGVVIIHQE LALVPYLSVA ENIFLGNERR GPDRLIDWNR
TNAEAAQLLE QVGLDENPTV QVASLGVGKQ QLIEIAKALS KRVRLLILDE PTAALNDTDS
EHLLGLLRQL QAQGITSIMI SHKLAEIAEI ADSTTVIRDG RTIETLDMAS PEATQARIIR
GMVGRDLDHR FPERVPAIGE EVLRVENWTV HHPTQSDRVV VSDANLVVHA GEVVGIAGLM
GAGRTELAMS IFGHSYGRDI SGTVRMRGRV VSTRTVDDAI ANGLAYATED RKRYGLNLID
DIRHNITAAA LGKVSRRGWV NDNEELKVAE EYRSSLNIRT PSVLAVVGKL SGGNQQKVVL
SKWIYTDADV LILDEPTRGI DVGAKYEIYT IVNRMVAAGK AVVVISSELP ELMGICDRIY
TLASGRITGD VPVAGATQER LMELMTAERR TTERDVLQR
|
|---|
| |