| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2996 |
|---|
| Symbol | |
|---|
| ID | 7860107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3337466 |
|---|
| End bp | 3338644 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643867094 |
|---|
| Product | Monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_002883003 |
|---|
| Protein GI | 229821477 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4214] ABC-type xylose transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTCG TCGCCAACAT CGGTGAGCTC GCCCGCCGCA ACATGCGGCA GAGCGGCATC
GTCGTCGCGT TCGTCGCGAT CGTGGTGCTG TTCTCGGTGC TCAACTCGAA CTTCCTGAGC
CCGGGCAACC TCACCAACAT CGTCCTGCAG TACTCCTACA TCCTCATCCT CGCGATCGGG
ATGCTCATCG TCATCGTCGG CGGGCACATC GACCTGTCCG TCGGGTCCGT CGTCGCGCTC
ACGGGTGCTG TCGCGGCCGT CCTCGTCGTC CGGAACGGGT ACCCGTGGTG GGTCGGCGTC
GCCGCGGCCA TCGTCGTCGG GCTCCTCGTC GGCGCCTGGC AGGGGTTCTG GGTCGCCGTC
GTCGGCATCC CCGCGTTCAT CGTCACGCTG GCCGGGATGC TCCTGTTCCG CGGTCTGACG
TATCAGGTGC TCGACAGCGT GTCGCTCTCA CCGTTCGGCG GTTCGTACTA CCTCATCGCG
AACGGCTTCC AGAACGGGCT CCTCGGGGGT CAGGGCTACG ACGTCTTCAC CCTGCTCATC
TTCGCGATCG CCGTGGCCGG CTACGCCGTC AGCCAGTGGC GCAGCCGGCA GGCCCGCCTG
CGCTACCAGC AGGTGGTCGA GGCGATGTGG CTCTTCGTCG CGAAGATCGT GCTCGTCGGC
ATCATCGCGA TGTGGTTCGC GTGGCAGCTC GCGAACTACC GAGGGCTCCC GAACGTGCTC
ATCATCCTGG CCGTGCTGAT CATCGCGTAC ACGCTCGTGA CGCAGAAGTC CGTGTTCGGC
CGCCACGTCT ACGCCATCGG GGGCAACCTC AACGCGGCGC AGCTGTCCGG CGTCAAGGTG
CGCCGGGTCA ACTTCTGGAT CTTCGTCAAC ATGGGCTTCC TCGCGGGGAT CGCGGGCGTC
GTCTACTCCT CGCGGTCGAA CGGTGCTCAG CCCGGTGCGG GCAACATGTT CGAGCTCGAC
GCGATCGCCG CCTGCTTCAT CGGCGGCGCG GCGGTGACGG GCGGCGTCGG GCGCGTCACC
GGCGCCATGG TCGGCGGCCT CATCATGGCC GTGATGAGCA ACGGGATGCA GCTCATGGGG
ATCGAGACCG CCGTGCAGCA GGTGGTCAAG GGCCTGGTGC TCCTGCTCGC CGTCGCGTTC
GACGTGTACA ACAAGAGGCG GGCCGGTGTC GCGCGCTGA
|
|---|
| Protein sequence | MTVVANIGEL ARRNMRQSGI VVAFVAIVVL FSVLNSNFLS PGNLTNIVLQ YSYILILAIG
MLIVIVGGHI DLSVGSVVAL TGAVAAVLVV RNGYPWWVGV AAAIVVGLLV GAWQGFWVAV
VGIPAFIVTL AGMLLFRGLT YQVLDSVSLS PFGGSYYLIA NGFQNGLLGG QGYDVFTLLI
FAIAVAGYAV SQWRSRQARL RYQQVVEAMW LFVAKIVLVG IIAMWFAWQL ANYRGLPNVL
IILAVLIIAY TLVTQKSVFG RHVYAIGGNL NAAQLSGVKV RRVNFWIFVN MGFLAGIAGV
VYSSRSNGAQ PGAGNMFELD AIAACFIGGA AVTGGVGRVT GAMVGGLIMA VMSNGMQLMG
IETAVQQVVK GLVLLLAVAF DVYNKRRAGV AR
|
|---|
| |