Gene Bcav_2995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2995 
Symbol 
ID7860106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3336247 
End bp3337428 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content74% 
IMG OID643867093 
ProductROK family protein 
Protein accessionYP_002883002 
Protein GI229821476 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGCC GAGCAGCGAC GTCCGGGTCG CAGTCCTCCC TGCGGGAGGC GAACCGGTCG 
CTGATCGTCG ACACGGTGAA GCAGTTCGGC GGCCTGACGC AGGTCGAGCT CGCCGGCGCC
ACGGGCCTCT CGGCCGCGAC GATCTCGACG ATCGTCAAGG AGCTGCTCGG AGCGGGCGTC
GTCGAGGTGC GCCCGACGTC CCGCAGCGGG CGCCGGGCGC AGATGGTGAC GCTCGCCCGG
CGGGTCGGTC TGGCCGCCGG GGTCCAGGTC GGGCACCGGA GCATGCGAGT CGTGCTCGGC
GACTTCAGCC ACACGGTCGT GGCGGAGCAG TCCCTGCCGC TGCCACACGA ACACCTCCTC
GACACCGGGC TCGACCGGGC GTCGCTGCTC ATCGCCGACC TGCTCGAGCG GGTCGGCTCG
CCGATCGACG AGCTCGTCGG CGTCGGGCTC GGACTGCCCG CACCGGTGGA CGGTGCCACG
GGCATGATCT CGGTGCGCGG CGTGATGCGC GGGTGGGACG GCGAGCACCT CGCGCACGTC
ATGTCGAAGC GCCTCGCGCG CCCGGTGCAC GTCGACAACG ACGCGAACCT CGGCGCCCTC
GCCGAGCACA CGCTCGGCGC GTCGCGCGAG CACCTGGACA GCGTCTACGT GCGCGCCTCG
TACGGGATCG GGGCGGGCGT CGTCCTCAAC GGGGCGGTGT ACCGCGGGTA CGCCGGGACG
GCCGGCGAGA TCGGGCACGT GCAGGTCGAC CCGCAGGGCG CGATCTGCCG CTGCGGCAAC
CGGGGTTGCC TCGACACCGT CGTCGGCGCG GACGCCCTGC TCGCCTCGCT GCGGGCGAGC
CACGGGAACC TCACGCTGCG CGACGTCATC GCGCTCGCCA CCGACGGCGA CCGGGGCTGC
GCCCGGCTGG TGGCGGACGC GGGGGAGGCG ATCGGCACCG TCGTCGCCGG ACTGTGCGCC
GCCGTGAACC CGCAGGTCGT GGTGGTGGGC GGGGAGCTGG CGGAGACCGG GGAGATCCTC
CTCGGCCCGC TCCGCGACGC CGTCCGGCGC GGCGTCCTGC GGAACCAGAT CGCCCCGCTC
GAGGTGGTGG CAGCGGAGCT CGGGCCGAGG GCAGAGGTGC TCGGCGCGCT CGTGCACGTG
CTGCAGTCCA CCGATGTCGA CATCCGAGGT GAGGACCGAT GA
 
Protein sequence
MIGRAATSGS QSSLREANRS LIVDTVKQFG GLTQVELAGA TGLSAATIST IVKELLGAGV 
VEVRPTSRSG RRAQMVTLAR RVGLAAGVQV GHRSMRVVLG DFSHTVVAEQ SLPLPHEHLL
DTGLDRASLL IADLLERVGS PIDELVGVGL GLPAPVDGAT GMISVRGVMR GWDGEHLAHV
MSKRLARPVH VDNDANLGAL AEHTLGASRE HLDSVYVRAS YGIGAGVVLN GAVYRGYAGT
AGEIGHVQVD PQGAICRCGN RGCLDTVVGA DALLASLRAS HGNLTLRDVI ALATDGDRGC
ARLVADAGEA IGTVVAGLCA AVNPQVVVVG GELAETGEIL LGPLRDAVRR GVLRNQIAPL
EVVAAELGPR AEVLGALVHV LQSTDVDIRG EDR