Gene Bcav_2994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2994 
Symbol 
ID7860105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3335421 
End bp3336212 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content71% 
IMG OID643867092 
ProductABC transporter related 
Protein accessionYP_002883001 
Protein GI229821475 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGG AGGTTCCCGT GCCGCTGCTC TCGGTCCGGG GGATCGGGAA GCGGTTCGGC 
GCGGTCGAGG CACTCGTGGA CGTCGACCTC GACGTCCACG CCCACGAGGT CGTCGCCCTC
GTCGGCGACA ATGCCGCCGG CAAGTCGACG CTGGCGAAGA TCGTCGCGGG CGTCCTCACG
CCCGACACCG GGCTGATCGA GATCGACGGC GCGCCGGTGC AGGTCCCGTC GCCGTCCGCC
GCGCACGACC TCGGGATCGC CACGGTGTTC CAGGACCTCG CCGTGTGCGA CAACCTCGAC
GTGACGGCGA ACCTGTTCCT CGGCCGGGAG CTGCGCACCG GCCGCGTGCT CGACGACGGT
CGCATGGAGC AGATCGCCCG CCGCGTGCTG CGTGACCTCT CCTCGCAGAT CGCCTCGGTG
CGGACGCCGC TCTCCCAGCT GTCCGCGGGT CAGCGCCAGT CCGTCGCGAT CGCGCGCACG
CTGATCGGGA ACCCGCGCAT CGTCGTCCTC GACGAGCCGA CGGCGTCGCT GTCGGTGGCG
CAGACGGCGG AGGTGCTCGT GCACATCGAG CGGCTGCGGG AGCTCGGGCT CGGGGTGATC
CTCATCAGCC ACAACATGAA CGACGTCCGT GCGGTGGGCG ACCGGATCGA GGTGCTGCGG
CACGGGCGCA ACAACGGGTC GTTCCACGGC CCGTCCACGG GCTCGGAGGA GATCATCGCC
GCGATCACGG GTGCACGCAT GGTCGCGCCG CCGAGCGCGA GCCACCGGCA CGCGATGCCG
ACGATGCGCT GA
 
Protein sequence
MITEVPVPLL SVRGIGKRFG AVEALVDVDL DVHAHEVVAL VGDNAAGKST LAKIVAGVLT 
PDTGLIEIDG APVQVPSPSA AHDLGIATVF QDLAVCDNLD VTANLFLGRE LRTGRVLDDG
RMEQIARRVL RDLSSQIASV RTPLSQLSAG QRQSVAIART LIGNPRIVVL DEPTASLSVA
QTAEVLVHIE RLRELGLGVI LISHNMNDVR AVGDRIEVLR HGRNNGSFHG PSTGSEEIIA
AITGARMVAP PSASHRHAMP TMR