| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2980 |
|---|
| Symbol | |
|---|
| ID | 7860091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 3322575 |
|---|
| End bp | 3324161 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643867078 |
|---|
| Product | D-aminoacylase domain protein |
|---|
| Protein accession | YP_002882987 |
|---|
| Protein GI | 229821461 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.572399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGA CCCTGCTGCT GTCGGGCGGG ATCGTCGTCG CTGGTCCCGA CTCCGTTCCC
GGCCGCAGCG ACCTGCTCGT GCGCGACGGC GTCGTGGTGG AGATCGGCCC GGCGCTCGAC
GCTCCCGGCG CCCATCGCGT CGACTGCACC GGCCGGGTGG TGATGCCGGG GTTCGTGGAC
GCGCACTCTC ACGCGGACGG CGTCGCACAC ACCGAGGACG TCCAGCTGGC CAACCTGCGC
CAGGGCGTGA CGACGGTGAT CACCGGTCAG GACGGCGTCG GTCAGGCGCC GGGAGACGGC
ACCTACGCCG ACTCCTACTT CGGAGCGCTC AACGGCGCCA ACCCGAGGTA CCGGGGCGAT
GGTATCGCCG GTCTGCTCGC TAGCTACGAC GGCTCCGGCT CGCTCAACGT CGGCTATCTC
GTCCCGGCCG GGACGGTGAG GCACGAGGTG CTCGGCCTGG AGCGGCGGAG CCCGACCGCT
CACGAGCTGC AGCGCATGAT CGAGCTGGTC GAGCTCGGGA TGCGCCAGGG CGCGCTCGGC
CTCTCGACCG GGCTGGACTA CGTCCCCGGC ATCTTCGCCG ACGCCGTCGA GCTGGCCGCG
CTCTGCGGCC CGGTGGCACG GCATGACGGC GTGCATGTCT CGCACATGCG TGGCGGGTAC
GAGCAGGCGG CACCGCTCGG GATCGCGGAG CTGCGCACGA TCGCCGACCT CAGCGGGGTC
CGGACCCATG TCTCGCACTT TCACGGTCCG GCCCAACTGA TCCGTTCGCT CATGGCGGCG
TTCGCGGCGG CGTCGGAGGT CACGTTCGAC GCCTACCCCT ACCGGCGCGG TTGCACGCTG
CTGGCGATGC CCCTGGTGCC GCCGGAGCTG CTCGAGCGCG GCCCCGACGC GGTCGCGGAG
CACCTGCGCG ATCCCGAGCT GCGCGCAGCC CTGGTGAGCA GCTACGGACC CGTGATCGCG
GAGCGACCCG ACATGGCGAC AACCTGGGCG GAGCGGACCA CCCTCGTGCA CGTGGCGGAC
GCGAAGCACG CCTGGGTAGC CGGCCTGACG CTGGCCGACG CCGCCGTCCG GTTGGGGCGG
CACCCGCTCG ACCTCGCTTA CGACCTGCTC GGTCGCAGCG CCCTCCAGGT GAGCGCGGTG
ATCGCGACTC CGGTACAACG CGACGTCGAC GAGCTCGCGT CGATCTTCAC CGACCCGCGC
CACGCCGCCG GGTCCGACGG CATCTACGTG GGTGCGCACC CGCACCCGCG CGGCTGGGGC
ACGTTCGCAC GGTTTCTGGG CAGGTACACC CGCGATCGGG GCGACTACGA CCTCCCGACC
GCGGCCGCTC ACCTGTCCAC CACTGCGGCG CGCGCCTTCA GGCTCGGGCG TCGCGGTCGG
ATCGCGCCCG GCTGGGTCGC CGATCTCGCC GTCATCGACC TCGCACGGGT GCAGGACGCG
GCCGACTACG GTAACCCCAG GCAGGCGGCC CTCGGGATCG ACGACGTCGT GGTGGCCGGG
GCACACGTGC TCGCTGACGG TCGCCTCACG GGGATCCCGG CTGGGCGTGG TGTCCGACGA
GAGCGACGCG AAGCGAGGAC AAGATGA
|
|---|
| Protein sequence | MTATLLLSGG IVVAGPDSVP GRSDLLVRDG VVVEIGPALD APGAHRVDCT GRVVMPGFVD
AHSHADGVAH TEDVQLANLR QGVTTVITGQ DGVGQAPGDG TYADSYFGAL NGANPRYRGD
GIAGLLASYD GSGSLNVGYL VPAGTVRHEV LGLERRSPTA HELQRMIELV ELGMRQGALG
LSTGLDYVPG IFADAVELAA LCGPVARHDG VHVSHMRGGY EQAAPLGIAE LRTIADLSGV
RTHVSHFHGP AQLIRSLMAA FAAASEVTFD AYPYRRGCTL LAMPLVPPEL LERGPDAVAE
HLRDPELRAA LVSSYGPVIA ERPDMATTWA ERTTLVHVAD AKHAWVAGLT LADAAVRLGR
HPLDLAYDLL GRSALQVSAV IATPVQRDVD ELASIFTDPR HAAGSDGIYV GAHPHPRGWG
TFARFLGRYT RDRGDYDLPT AAAHLSTTAA RAFRLGRRGR IAPGWVADLA VIDLARVQDA
ADYGNPRQAA LGIDDVVVAG AHVLADGRLT GIPAGRGVRR ERREARTR
|
|---|
| |