Gene Bcav_2971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2971 
Symbol 
ID7860082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand- 
Start bp3314078 
End bp3314647 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content73% 
IMG OID643867069 
ProductdTDP-4-dehydrorhamnose 35-epimerase related 
Protein accessionYP_002882978 
Protein GI229821452 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.305004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTCAC CGCGCATCGT CGACCGTCGC CACGAGCCCA CGGCGATCGA CGGGCTCCAC 
GTGCTCCACG TCAAGGAGAT CCACGACGAG CGCGGCACGA TCCGCGAGTT CTTCCGCGCG 
AGCGCGATGG CCGAGGCAGG GCTGCACGGA GGCGCGTGGC AGCAGCTCAA CCTCACCGAG 
ACGTCACGTG GAGCGATCCG CGGCCTGCAC GGGGAGCAGA TGACGAAGCT CGTCTCCGTC 
GTCGCGGGTC AGGCGTTCGG CGCCTACGTC GACGCGCGGC CGGGCTCGGC GACGGCCGGC 
GCCGTCGTCA CCGTCCCGCT GACGCTCGGC GTCCAGGTGC TCGTGCCGCC CGGCGTGTGC 
AACGGCTTCC AGGCGCTCGC GGACGGCACG CAGTACCTGT ACTGCTTCGA CGCCGAGTGG 
GTGCCCGGGA TGCCCGGCAG GGCGGTGCAC CCGCTCGATC CGGCTCTGGG GATCGCGTGG 
CCGATCGCCG TCGACCCCGC TGACCGGGAG CGGTTGTCCG CGAAGGATGC CGGGCTGCCC 
AGCCTGGCCG ACGTGCTCGC CGCGGGCTGA
 
Protein sequence
MPSPRIVDRR HEPTAIDGLH VLHVKEIHDE RGTIREFFRA SAMAEAGLHG GAWQQLNLTE 
TSRGAIRGLH GEQMTKLVSV VAGQAFGAYV DARPGSATAG AVVTVPLTLG VQVLVPPGVC 
NGFQALADGT QYLYCFDAEW VPGMPGRAVH PLDPALGIAW PIAVDPADRE RLSAKDAGLP 
SLADVLAAG