Gene Bcav_2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2966 
Symbol 
ID7860077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3310044 
End bp3310589 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content72% 
IMG OID643867064 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002882973 
Protein GI229821447 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0460373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCG ACGAGGTGCT GACCGTGCTC GTGAGCGAGC GGCGGCGAGC GCTGGTCGGG 
TACGCGTACC TGCTGTGCGG GTCTCTCGCG GAGGCGGAGG AGCTCGTGCA GGAGTCACTG
ATGCGCACGT ACGTGCGGCT CGGCCGCGGC GCCGACGTCC ACGACGCCGA GCCGTACGTC
CGGCGGTCGA TCCTGCGCCT GTACGTGGAC GGGTACCGCC GACGACGGCG ATGGCTCGAC
GTCCGGCACC TCGTCGTCAC CCAGGAGCAC GGCGGGGACG TCGAGCTCAC GGCGGCCCAG
CTCGACGTCC GCGGCGCGCT GAGCACGCTT CCCCGACGTG AGCGCGCCTG CGTCGTCCTG
CGCTACTACT CCGACCTCAC GGTCCGGCAG ATCGCCGAAC AGCTGGGCGT CAGCGAGGGC
GCGGTGAAGC GGTACCTGAG TCAGGGAGTC CGGCGGCTCG AAGGGGTCCT GGGCCCTGGC
GGCACCGCCG TCGACGACGC GGGTCGGCTC GATCCCGATC GCCCGTCGTC GGGGAGGGTC
CCATGA
 
Protein sequence
MTPDEVLTVL VSERRRALVG YAYLLCGSLA EAEELVQESL MRTYVRLGRG ADVHDAEPYV 
RRSILRLYVD GYRRRRRWLD VRHLVVTQEH GGDVELTAAQ LDVRGALSTL PRRERACVVL
RYYSDLTVRQ IAEQLGVSEG AVKRYLSQGV RRLEGVLGPG GTAVDDAGRL DPDRPSSGRV
P