Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2966 |
Symbol | |
ID | 7860077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3310044 |
End bp | 3310589 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643867064 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002882973 |
Protein GI | 229821447 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0460373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCCG ACGAGGTGCT GACCGTGCTC GTGAGCGAGC GGCGGCGAGC GCTGGTCGGG TACGCGTACC TGCTGTGCGG GTCTCTCGCG GAGGCGGAGG AGCTCGTGCA GGAGTCACTG ATGCGCACGT ACGTGCGGCT CGGCCGCGGC GCCGACGTCC ACGACGCCGA GCCGTACGTC CGGCGGTCGA TCCTGCGCCT GTACGTGGAC GGGTACCGCC GACGACGGCG ATGGCTCGAC GTCCGGCACC TCGTCGTCAC CCAGGAGCAC GGCGGGGACG TCGAGCTCAC GGCGGCCCAG CTCGACGTCC GCGGCGCGCT GAGCACGCTT CCCCGACGTG AGCGCGCCTG CGTCGTCCTG CGCTACTACT CCGACCTCAC GGTCCGGCAG ATCGCCGAAC AGCTGGGCGT CAGCGAGGGC GCGGTGAAGC GGTACCTGAG TCAGGGAGTC CGGCGGCTCG AAGGGGTCCT GGGCCCTGGC GGCACCGCCG TCGACGACGC GGGTCGGCTC GATCCCGATC GCCCGTCGTC GGGGAGGGTC CCATGA
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Protein sequence | MTPDEVLTVL VSERRRALVG YAYLLCGSLA EAEELVQESL MRTYVRLGRG ADVHDAEPYV RRSILRLYVD GYRRRRRWLD VRHLVVTQEH GGDVELTAAQ LDVRGALSTL PRRERACVVL RYYSDLTVRQ IAEQLGVSEG AVKRYLSQGV RRLEGVLGPG GTAVDDAGRL DPDRPSSGRV P
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