Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2963 |
Symbol | |
ID | 7860074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 3306801 |
End bp | 3307556 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643867061 |
Product | ABC transporter related |
Protein accession | YP_002882970 |
Protein GI | 229821444 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00665747 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCATCC TCGACCTCAC CAGCGCCGGC GAGGGCCCGG AGCCGACCAC CGGTGAGGGC ACGGACGGCG CAGCCGCCGA GCAGCACCCC GTCGTCGAGC TGCGCGGCGT CTCGCGATCG TTCCCGGGCG ACCCGCCGGT GGTCGCCTTG CATCCGACGT CGCTGCGCGT CGCGGCCGGG GACTACGTCT CGATCGTCGG CCCGTCTGGC TCGGGGAAGT CGACGCTCCT CAACGTCCTG GGCCTGCTCG ACCGACCGTC GACCGGCGAG TACCTGCTCG ACGGCGAGGC GACCCGCGCT GCCGGCGAGC GACGACGGAC GGCGCTGCGC GGGGGGCGCA TCGGGTTCGT GTTCCAGGCG TTCCACCTCC TGCCGCACCG GACGGTGCTC GAGAACGTCG TCCTGGCCAC GATGTACTCC GGCGTCCCGC GCGCCGAACG GCTGCCCCGC GCTGTCGCCG CCCTGCGCCG GGTGCGGCTG GAGCACCGGC TCGACTTCCG CCCCACGACC CTCTCCGGCG GGGAGCGCCA GCGGGTCGCC GTCGCCCGCG CCGTCGTCAC CAATCCCCAC CTCCTGCTCG CCGACGAGCC GACCGGGAAC CTCGACTCCT CGACGTCCGG CGAGGTCCTC GACCTGTTCG ACGAGCTCCA CGCCGACGGG CTGACCCTGC TGGTGATCAC GCACGACGAC GCCGTCGCCG CCCGGGCGCA GCGTCAGGTG CGGATCACCG ACGGCGTCGT GACGGAAGTC GCGTGA
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Protein sequence | MSILDLTSAG EGPEPTTGEG TDGAAAEQHP VVELRGVSRS FPGDPPVVAL HPTSLRVAAG DYVSIVGPSG SGKSTLLNVL GLLDRPSTGE YLLDGEATRA AGERRRTALR GGRIGFVFQA FHLLPHRTVL ENVVLATMYS GVPRAERLPR AVAALRRVRL EHRLDFRPTT LSGGERQRVA VARAVVTNPH LLLADEPTGN LDSSTSGEVL DLFDELHADG LTLLVITHDD AVAARAQRQV RITDGVVTEV A
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