Gene Bcav_2963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2963 
Symbol 
ID7860074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3306801 
End bp3307556 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content74% 
IMG OID643867061 
ProductABC transporter related 
Protein accessionYP_002882970 
Protein GI229821444 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00665747 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCATCC TCGACCTCAC CAGCGCCGGC GAGGGCCCGG AGCCGACCAC CGGTGAGGGC 
ACGGACGGCG CAGCCGCCGA GCAGCACCCC GTCGTCGAGC TGCGCGGCGT CTCGCGATCG
TTCCCGGGCG ACCCGCCGGT GGTCGCCTTG CATCCGACGT CGCTGCGCGT CGCGGCCGGG
GACTACGTCT CGATCGTCGG CCCGTCTGGC TCGGGGAAGT CGACGCTCCT CAACGTCCTG
GGCCTGCTCG ACCGACCGTC GACCGGCGAG TACCTGCTCG ACGGCGAGGC GACCCGCGCT
GCCGGCGAGC GACGACGGAC GGCGCTGCGC GGGGGGCGCA TCGGGTTCGT GTTCCAGGCG
TTCCACCTCC TGCCGCACCG GACGGTGCTC GAGAACGTCG TCCTGGCCAC GATGTACTCC
GGCGTCCCGC GCGCCGAACG GCTGCCCCGC GCTGTCGCCG CCCTGCGCCG GGTGCGGCTG
GAGCACCGGC TCGACTTCCG CCCCACGACC CTCTCCGGCG GGGAGCGCCA GCGGGTCGCC
GTCGCCCGCG CCGTCGTCAC CAATCCCCAC CTCCTGCTCG CCGACGAGCC GACCGGGAAC
CTCGACTCCT CGACGTCCGG CGAGGTCCTC GACCTGTTCG ACGAGCTCCA CGCCGACGGG
CTGACCCTGC TGGTGATCAC GCACGACGAC GCCGTCGCCG CCCGGGCGCA GCGTCAGGTG
CGGATCACCG ACGGCGTCGT GACGGAAGTC GCGTGA
 
Protein sequence
MSILDLTSAG EGPEPTTGEG TDGAAAEQHP VVELRGVSRS FPGDPPVVAL HPTSLRVAAG 
DYVSIVGPSG SGKSTLLNVL GLLDRPSTGE YLLDGEATRA AGERRRTALR GGRIGFVFQA
FHLLPHRTVL ENVVLATMYS GVPRAERLPR AVAALRRVRL EHRLDFRPTT LSGGERQRVA
VARAVVTNPH LLLADEPTGN LDSSTSGEVL DLFDELHADG LTLLVITHDD AVAARAQRQV
RITDGVVTEV A