Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2958 |
Symbol | |
ID | 7860069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 3300893 |
End bp | 3301681 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643867056 |
Product | transcriptional regulator, DeoR family |
Protein accession | YP_002882965 |
Protein GI | 229821439 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00162277 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000126005 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGACCGACA CCCCCCTGCT CGCCGATCAG CGGCGGGCGC GCATCCTCGC CGAGGTGGCG CGCACCGGGG GCGTCCGGGT CGCGGACCTG GTCGAGGCGC TCGGCGTGTC GGAGATGACC GTGCGTCGGG ACATCACGGC GCTCGACCGC GACGGACTCC TCACCCGTGT GCACGGCGGC GCGGTCGACC GCGAGGGCAG CGCGAGCGAG CCGGCGTTCG CCGAGAAGCT CGCGCGCAGC GCCCCGGCCA AGGCCGCGAT CGCCGCGCGC GCTGCCGCGC TCGTCGAGCC CGGCGCCGCC GTCGCCATCT CGGGCGGCAC GACGACGATG GCGCTCGCCA GCGCCGTGGC CGGCCTCGAG CACGCCGCCT CGTTGACGAT CCTCACGAAC TCCCTGCCCG CGGCGGACGT GCTGCACGCC GCCCCGCGCC GGCCGACGGT CATCCTCACC GGAGGAGAGC GGACGCCGTC GGACGCGCTC GTCGGTCCCG CTGCCGTCCG GACCTGCGCG GACTTCCACG TGGACGTCCT GTTCCTCGGC GTCAGCGGGA TGGACGGGCG GGCCGGCCTC ACGACGCCGA ACCTCGCCGA GGCCGAGACG CTCGCCGCCC TGATCGGGTG CGCGCAACGC GTCGTCGTGC TGGCCGACTC GGCCAAGTGG GGAGTGGTCG GACTGCGGAC GCTCGCCCGG TGGGACGCCG TCGACATCCT CGTCACCGAC CCCGACCTTC CGCCGGACGC CCGCGAGGCG CTCGGCGAGA CCACCGAGAT CCTGGAGGCC ACCCCGTGA
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Protein sequence | MTDTPLLADQ RRARILAEVA RTGGVRVADL VEALGVSEMT VRRDITALDR DGLLTRVHGG AVDREGSASE PAFAEKLARS APAKAAIAAR AAALVEPGAA VAISGGTTTM ALASAVAGLE HAASLTILTN SLPAADVLHA APRRPTVILT GGERTPSDAL VGPAAVRTCA DFHVDVLFLG VSGMDGRAGL TTPNLAEAET LAALIGCAQR VVVLADSAKW GVVGLRTLAR WDAVDILVTD PDLPPDAREA LGETTEILEA TP
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