Gene Bcav_2949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2949 
Symbol 
ID7861368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3291004 
End bp3292152 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content77% 
IMG OID643867047 
ProductMannose-1-phosphate guanylyltransferase (GDP) 
Protein accessionYP_002882956 
Protein GI229821430 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00041034 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGAGCG CGCCGGAGCA GGCAGCCCCC GAGGTGGGCG GCCCGATCGA GGACCTGTAC 
GCCGTCGTCC CCGCCGGCGG AGCCGGGACG CGCCTGTGGC CGCTGTCGCG CCGCGCACAC
CCGAAGTTCC TGCTGGACCT CACCGGGTCG GGGCGCACCC TGCTCCAGGG CACCTGGGAC
CGGCTGCAGC CGCTGACCGG GCCGGATCGG GTGGTGGTCG TCACCGGGCG GGCGCACGCC
GGCGCCGTCG CGGAGCAGCT GCCGGACCTG CCCGCCGACG CGCTGCTCGC CGAGCCGTCG
CCCCGCGACT CCATGGCGGC GATCGGGCTC GCTGCCGCCG TCCTCGCGCA CCGGCACGGC
GACGTCGTCC TCGCCTCGTT CGCCGCCGAT CACGTGATCC ACGGGGAGGC CGCGTTCGCG
CAGGCGGTCG GGGCCGCCGT CGCCGCGGCC CGGGACGGCG CCGTCGCGAC CATCGGGATC
GCCGCCACCA CGCCGTCGAC GGCGTTCGGG TACATCGAGG TGGGCGAACC GCTGCCCGGG
GCGGCGGGGG AGCGCGGCGC GCGTGGCGTC GTCGCTTTCC GGGAGAAGCC CGACGCCGCC
ACTGCCGCGG AGTACGTCGC CGACGGCCGC CACCGGTGGA ACGCGGGCAT GTTCGTGGTC
CGCGCGCGCG TGCTGCTCGA CCATCTCGCC CAGCAGCGGC CGGAGCTCGC CGCCGGCCTC
ACCGAGATCG CTGCCGCCTG GGACACACCG GCCGAGCCCG ACACCCTCGC GCGCGTGTGG
CCGACGCTCG AGAAGATCGC CATCGACTAC GCGATCGCCG AACCCGTGGC GGCCGCCGGC
GGCGTCGCGG TCGCCCCGGG GGACTTCGCC TGGGACGACG TCGGCGACTG GGACTCCCTC
GGTGCGCTGC TGGCGCCGGA CGCCGGCGGC GTGCACGTGC TCGGCGACGC CGACGCGACG
CTCGTGCGGG ACTCCGCGGG CGCCGTCGTC GTGGCCGCCG GCGCACGCAC GGTGACGGTC
CTGGGCGTGC CGGACGCCGT CGTCGTCGAC ACCCCCGACG CGCTGCTCGT CACGACACGG
GACCAGGCGC AAGGCGTGAA GCGCGCCGTG GACGCGCTCG CCGAGCGGGG CGCCGACCGC
CTGCTGTAG
 
Protein sequence
MQSAPEQAAP EVGGPIEDLY AVVPAGGAGT RLWPLSRRAH PKFLLDLTGS GRTLLQGTWD 
RLQPLTGPDR VVVVTGRAHA GAVAEQLPDL PADALLAEPS PRDSMAAIGL AAAVLAHRHG
DVVLASFAAD HVIHGEAAFA QAVGAAVAAA RDGAVATIGI AATTPSTAFG YIEVGEPLPG
AAGERGARGV VAFREKPDAA TAAEYVADGR HRWNAGMFVV RARVLLDHLA QQRPELAAGL
TEIAAAWDTP AEPDTLARVW PTLEKIAIDY AIAEPVAAAG GVAVAPGDFA WDDVGDWDSL
GALLAPDAGG VHVLGDADAT LVRDSAGAVV VAAGARTVTV LGVPDAVVVD TPDALLVTTR
DQAQGVKRAV DALAERGADR LL