Gene Bcav_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2947 
Symbol 
ID7861366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3288416 
End bp3289543 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content69% 
IMG OID643867045 
Productbasic membrane lipoprotein 
Protein accessionYP_002882954 
Protein GI229821428 
COG category[R] General function prediction only 
COG ID[COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000370939 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAGAAGT CGACCTTTGG CATGGCGGGC ATCGCCGCCA TCGCGCTGAC GCTCGCCGCG 
TGCGGCGCTG CCCCCGAGGA GGAGGAGACA GCAGGCGGCT CCGAGGAGAC CTCCGACGGC
GGCAGCGGCG TGGTGGAGGG CTTCAAGGCC TGCATGGTGT CCGACCAGGG CGGCTGGGAC
GACCAGTCGT TCAACCAGTC CGGCTTCGAG GGCCTCGAGC GTGCCGCCGA CGAGCTCGGC
GTCGAGGTGA ACTCCGTCGA GTCCACCGCC GACGCGGACT ACGGCCCCAA CATCGACAGC
CTCGTCCAGG ACGGCTGCAC CTACATCATC GGGGTCGGCT TCCTGCTCGA GCAGGCGATC
CAGGACGCCG CTGTCGCGAA CCCGGACCTG CAGTTCGCGC TCATCGACTC CTCGCTGTCC
GACCCGGGCG CCACCGAGGC CGACCCGCCG GTGCCGGTCG AGCTGGACAA CGTCAAGCCG
CTCCTGTTCA ACACGGCCGA GGCCGCGTTC CTGGCGGGTT ACGTCGCCGG GTCGCAGACC
GAGACCGGCG TCGTCGGCAC GTTCGGCGGC CTCCCGATCC CGTCGGTGAA CATCTTCATG
GACGGCTTCG TCGACGGCGT CGCCCAGTGG AACACCGACA GCGGTGACGA CGTCCAGGTG
CTCGGTTGGG ACAAGGAGAC GCAGGACGGC CAGTTCTCCG GCGACTTCGA GACCCAGGCC
AACGGGCAGA ACATCACCCA GGGCTTCCTC AACCAGAACG CCGACATCGT GATGCCGGTC
GCCGGTCCCG TCGGTCTCGG TGCCGCCGCG GCCGCCGAGG GCGTCGAGGG CACCCGGATC
ATCTGGGTCG ACTCCGACGG CTTCGAGTCG ACCGAGTACG GCGACATCAT CCTCACGTCC
GTCGTGAAGG AGATCGGCGC GGCGGTGTTC GACTCCATCG ACGAGGCCTC GCAGGGCAAC
TTCTCCAGCG AGCCGTACGT CGGCACGCTC GAGAACGAGG GCGTGGCGCT CGCGCCGTTC
CACGACTTCG AGGACGCGGT CCCGGCGGAC GTCGTGGACC GGGTGGCCGA GCTCCGGGAG
CAGATCATCT CGGGCGAGCT CGTCGTCGAG TCCCCGAACA CCCCCTGA
 
Protein sequence
MKKSTFGMAG IAAIALTLAA CGAAPEEEET AGGSEETSDG GSGVVEGFKA CMVSDQGGWD 
DQSFNQSGFE GLERAADELG VEVNSVESTA DADYGPNIDS LVQDGCTYII GVGFLLEQAI
QDAAVANPDL QFALIDSSLS DPGATEADPP VPVELDNVKP LLFNTAEAAF LAGYVAGSQT
ETGVVGTFGG LPIPSVNIFM DGFVDGVAQW NTDSGDDVQV LGWDKETQDG QFSGDFETQA
NGQNITQGFL NQNADIVMPV AGPVGLGAAA AAEGVEGTRI IWVDSDGFES TEYGDIILTS
VVKEIGAAVF DSIDEASQGN FSSEPYVGTL ENEGVALAPF HDFEDAVPAD VVDRVAELRE
QIISGELVVE SPNTP