Gene Bcav_2945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2945 
Symbol 
ID7861364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3285448 
End bp3286695 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content72% 
IMG OID643867043 
Productinner-membrane translocator 
Protein accessionYP_002882952 
Protein GI229821426 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000485003 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAGT CTCAGGCGCC CCCACCGGCC ACGCCCCCAC CGGCCACGCT CCCGCCCGAC 
ACGAGCGAGG CCGGCCCGAC CCGCAGCGAG AGCCTGCTCC GGGACATCCT GTCCTCGTCG
TGGGTGATGA CGCTCGCCGC GATCGTGCTG GCGCTCGTCA TCGGTGCGGT GCTCGTCATC
GCCGCCGACC CGGACGTGCA GGCCGCCGCC GTCTACTTCT TCGCTCGGCC GGCCGACTTC
CTCGCCGCGG CGTGGGACGC CGTCTTCGCC GCCTACAGCG CGCTCCTGCA GGGGGCGATC
GTGGACTGGC AGGCCACGTC CTTCCAGCGC GCCGTCCGGC CGATCACCGA GACGATGACG
ATCTCGGTGC CGCTCATCCT GGCCGGCCTG GGGATCGGCA TCGGCTTCCG CTCCGGGCTG
TTCAACATCG GCGCCCAGGG CCAGATGATC CTCGGTGCGA TCCTCGCCTC CTACCTCGGC
TTCACGCTGC AGCTTCCCGG TGTGCTGCAC GTCTTCGTCG CGCTCGTCGG AGCGGCCGTC
GGAGGCGCGG TGTGGGCGGG GATCGCCGGC GTCCTCAAGG CGCGCACCGG CGCCCACGAG
GTCATCGTCA CGATCATGCT CAACAACATC GCGGTGTACC TGGTGCTGTA CGTGCTCACG
CTGCGCGTCT TCGAGAGCGG GACCCCGCAG GTCGCCAAGC CGGTCCGGGA CTCCGCGATG
CTGCCGCTGC TCCTCGGGCC GGGGTTCCGC CTGCACCTCG GGTTCGTGCT GGCGCTGCTC
GCCGCGGTCG GGGTGTGGTG GCTCATGGAG CGTTCGGTGC TCGGGTTCCG CTTCCGCGCC
GTCGGCTCCA ACGCGAACGC CGCCCGTACT GCCGGCATCT CGGTCGCCGG CGTCACGGTG
GCCGTCATGG CGATCGCCGG CGCGCTGGCC GGCCTCGGTG GCGGGATGCA GCTCCTCGGG
ACGGAGCGCA ACCTCACCGG GTCCATCGCG GGGACCGTCG GCTTCGACGC GATCACCGTC
GCGCTGCTCG GCCGCTCGAA GCCGCTCGGG ACCGTGCTCG CCGGCCTGCT GTTCGGCGCG
TTCGCGGCGG GCGGGCGTCT CATGCAGACC CGCACCGGGA CGCCGATCGA CCTGGTCCTC
GTGCTCCAGT CGCTCATCGT CCTGTTCATC GCTGCGCCCC CGTTGGTCAG GTCGGTGTTC
CGGCTGCCGG CCCCCGGCGC CCGTCGTCGC TCGGAGGCGC TCGCATGA
 
Protein sequence
MTESQAPPPA TPPPATLPPD TSEAGPTRSE SLLRDILSSS WVMTLAAIVL ALVIGAVLVI 
AADPDVQAAA VYFFARPADF LAAAWDAVFA AYSALLQGAI VDWQATSFQR AVRPITETMT
ISVPLILAGL GIGIGFRSGL FNIGAQGQMI LGAILASYLG FTLQLPGVLH VFVALVGAAV
GGAVWAGIAG VLKARTGAHE VIVTIMLNNI AVYLVLYVLT LRVFESGTPQ VAKPVRDSAM
LPLLLGPGFR LHLGFVLALL AAVGVWWLME RSVLGFRFRA VGSNANAART AGISVAGVTV
AVMAIAGALA GLGGGMQLLG TERNLTGSIA GTVGFDAITV ALLGRSKPLG TVLAGLLFGA
FAAGGRLMQT RTGTPIDLVL VLQSLIVLFI AAPPLVRSVF RLPAPGARRR SEALA