| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2940 |
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| Symbol | |
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| ID | 7861359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3280169 |
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| End bp | 3281464 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643867038 |
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| Product | pyrimidine-nucleoside phosphorylase |
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| Protein accession | YP_002882947 |
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| Protein GI | 229821421 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0974765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00313698 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGAGC CCTTCGACGC CGTCGACGTC ATCCGCACGA AGCGCGACGG CGGGGCGCTC
ACCACCGCAC AGATCGACTG GGTCCTGGAC GCCTACGTCC GGGACGCCGT CGCCGAGGAG
CAGATGGCCG CGCTCGCGAT GGCGATCCTG CTGCGCGGGC TCTCCCGCGA GGAGCTTGCC
GCGTGGACGA CGGCGATGAT CGCGAGCGGC GAGCGGATGG ACTTCTCCGG GCTGTCGCGG
CCGACCGTCG ACAAGCACTC GACGGGCGGG GTCGGCGACA AGATCACGCT CCCGCTCGCA
CCGCTCGTGG CCACGTTCGA CGTCGCGGTC CCGCAGCTGT CCGGCCGCGG GCTCGGCCAC
ACGGGCGGCA CGCTCGACAA GCTCGAGGCG ATCCCCGGCT GGCGGGCGGC CCTCACGAAC
GACGAGATGC TCGCCCAGCT CGACGACGTC GGTGCGGTGA TCTGTCAGGC AGGATCTGGG
CTCGCTCCCG CTGACCGGAG GCTGTACGCG CTGCGCGACG TCACCGGGAC GGTGGAGTCG
ATCCCGCTGA TCGCGAGCTC GATCATGAGC AAGAAGATCG CGGAGGGCAC CGGCGCGCTG
GTCCTCGACG TCAAGGTCGG GTCGGGGGCG TTCATGAAGG ACCTCGACGA CGCGCGGGAG
CTCGCGCGCA CGATGGTCGC CCTGGGCACG GATGCGGGGG TGACGACGAC GGCGCTGCTC
ACCGACATGT CGACGCCGCT CGGGCTCACG GCCGGGAACG CGCTCGAGGT GCGGGAGTCG
GTCGAGGTGC TCGCCGGCGG GGGACCGGCC GACGTCGTCG AACTGACCCT CGCCCTCGCC
CGCGAGATGC TCGACGCCGC CGGCCGCCCG GACGCCGACC CCGCCGCCGC GCTCGCGGAC
GGCCGGGCGA TGGACACCTG GCGGCGCATG ATCGCGGCGC AGGGCGGCGA CCCGGACGCG
CCGCTGCCGA GCGCCCGGCA CAGCGAGGAC GTGCTCGCCC CCGCGGACGG CGTGCTCGTG
ACGCTCGACG CGTACGCCGT GGGGGTCGCC GCGTGGCGGC TCGGCGCGGG CCGCGCCCGC
CGGGAGGACC CGGTGCAGGC GGGCGCCGGC GTCGAGCTGC ACGCGAAGCC GGGCGCGCTG
GTCCGGGCCG GGGAGCGCCT GCTCACCCTC CACACGGACA CGCCGGAACG GTTCGCGCGC
GCGCACGAGG CGCTCGAGGC GGCCGTGACG ATCGCACCCG AGGGCGCCCG GCCCGCCGGC
GGCGGCGTCG TGCTCGAACG CGTGGACGCG GCGTGA
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| Protein sequence | MAEPFDAVDV IRTKRDGGAL TTAQIDWVLD AYVRDAVAEE QMAALAMAIL LRGLSREELA
AWTTAMIASG ERMDFSGLSR PTVDKHSTGG VGDKITLPLA PLVATFDVAV PQLSGRGLGH
TGGTLDKLEA IPGWRAALTN DEMLAQLDDV GAVICQAGSG LAPADRRLYA LRDVTGTVES
IPLIASSIMS KKIAEGTGAL VLDVKVGSGA FMKDLDDARE LARTMVALGT DAGVTTTALL
TDMSTPLGLT AGNALEVRES VEVLAGGGPA DVVELTLALA REMLDAAGRP DADPAAALAD
GRAMDTWRRM IAAQGGDPDA PLPSARHSED VLAPADGVLV TLDAYAVGVA AWRLGAGRAR
REDPVQAGAG VELHAKPGAL VRAGERLLTL HTDTPERFAR AHEALEAAVT IAPEGARPAG
GGVVLERVDA A
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