| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2934 |
|---|
| Symbol | |
|---|
| ID | 7861353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 3275049 |
|---|
| End bp | 3276824 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 643867032 |
|---|
| Product | phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I |
|---|
| Protein accession | YP_002882941 |
|---|
| Protein GI | 229821415 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1109] Phosphomannomutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0389398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000604145 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCGC TCGACGACGA CGTCGCGGCC CGCGCGGCCG CCTGGATCGA CGACGATCCC
GACCCCGCCG CCGCCGCCGA GCTCACCGCG GTGCTGGCCG CCGCCCGCGC GGGCGACCCG
GACGCCGTCG TCGATCTCGC CGACCGGTTC TCCGGCCCGC TCGAGTTCGG CACGGCCGGC
CTGCGAGGCC CGCTCGGTGC GGGCGAGCAC CGGATGAACC GGGCCGTCGT GATCCGCGCG
GCGGCCGGCC TGTCCGCGTT CCTCGCGGCC GAGCTGCCCG GCGAGCGCCC CCGCGTGGTG
ATCGGCTTCG ACGCCCGCCA CGGGTCCGCG CAGTTCGCGC GGGACACGGC CGCCGTCGTC
ACGGCCGCGG GAGGCGAGGC GATCCTGCTC GCGCGCGCGT GGCCGACGCC GGTGCTCGCC
TTCGCCGTGC GGCAGCTGGA CGCGGACGCG GGCGTGATGG TGACGGCCAG CCACAACCCG
CCCGCCGACA ACGGCTACAA GGTGTACCTC GGCGGGCGAG TGGTCACGGA CGCCGGGCAG
GGCGCCCAGA TCGTGCCGCC GTACGACGCC GCCATCGCGA GCCGGATCGC CGCCGTCGAC
GCCGTCGCGT CCGTGCCGCG AGCCACCGAG GGCTGGACGA CCCTCGGCGA GGCGGTCCTC
GAGGACTACC TGGTGCGCGC CGCGGGGCTG GCCGCCCCGG GCTCCGCCGA CCTGCGCATC
GTGCTCACGC CGCTGCACGG CGTCGGCGGT GCCGCTGCCG CGGAGGCCCT GCGGCGGGCC
GGCTTCGACG ACGTCCACGT CGTCGCCGCC CAGGCCGCAC CGGATCCCGA CTTCCCGACC
GTCGCGTTCC CGAACCCCGA GGAACCCGGC GCCCTGGACC TCGCCTTCGC GCTCGCCCGG
GACGTCTCCG CCGACCTCGT GCTCGCCGTC GACCCGGACG CGGACCGGTG CGGCGTCGCG
GTCCCCGACG CCGCCGCCGC GGAACGCTGG CGGCGCCTGT CCGGGGACGA CGTCGGCGCG
CTGCTCGGCG CCCAGGCGGC GGCGCTCGCC GTCGCGGGGG GTGCCGGCGC CGAGCCGGAG
CCGCCGGTGC TCGCGAGCTC CATCGTGTCC TCCCGCCTCC TGGCGCGGAT CGCCGCCGCC
CACGGCCTGC GCCACCGGTC CACGCTCACC GGCTTCAAGT GGATCAGCCG CGTGCCCGGG
CTCGCGTACG GCTACGAGGA GGCGCTCGGC TACTGCGTGG ATCCGGCGGC GGTCCGCGAC
AAGGACGGCA TCAGCGCCGC CGTGCGGGTC GCGTCCCTCG CCGCCGCGCT GCGCGCCGAG
AACCGCTCGC TCGATGATGC CCTCGACGAC CTCGCCCGGG AGCACGGGCT CCACGTCACC
GCTCCGCTGA CGGTCCGCGT CGACGACCTC GCGCTGATCC CGGCCGCCAT GCGCCGCCTG
CGGGAGCACC CGCCGACGTC GCTGGCGGGC TCGCCCGTCG TCCGATCCGT CGACCTCACG
CTCGGGCTGC GCGTCGCCAC GCCGGAGGGG CACTACGACG TCCCGCCGAC GGAGGGCCTG
CTGTACGAGA CGCAGGACGG CGACCGGGTG ATCGTGCGGC CCAGCGGAAC CGAACCGAAG
CTCAAGGCGT ACCTCGAGGT GGTGCAGGAG GTGGGCCCCG GGGACCTCGC GCCGGCCCGC
GCTGACGCCG CCGCCCGGCT CGCCGACATC ACCGCCGACC TGCGCCGGGC GATCGGCCTC
GACGGCACGG CCGCCGGCAC CCCGACGAGC CGCTAA
|
|---|
| Protein sequence | MTALDDDVAA RAAAWIDDDP DPAAAAELTA VLAAARAGDP DAVVDLADRF SGPLEFGTAG
LRGPLGAGEH RMNRAVVIRA AAGLSAFLAA ELPGERPRVV IGFDARHGSA QFARDTAAVV
TAAGGEAILL ARAWPTPVLA FAVRQLDADA GVMVTASHNP PADNGYKVYL GGRVVTDAGQ
GAQIVPPYDA AIASRIAAVD AVASVPRATE GWTTLGEAVL EDYLVRAAGL AAPGSADLRI
VLTPLHGVGG AAAAEALRRA GFDDVHVVAA QAAPDPDFPT VAFPNPEEPG ALDLAFALAR
DVSADLVLAV DPDADRCGVA VPDAAAAERW RRLSGDDVGA LLGAQAAALA VAGGAGAEPE
PPVLASSIVS SRLLARIAAA HGLRHRSTLT GFKWISRVPG LAYGYEEALG YCVDPAAVRD
KDGISAAVRV ASLAAALRAE NRSLDDALDD LAREHGLHVT APLTVRVDDL ALIPAAMRRL
REHPPTSLAG SPVVRSVDLT LGLRVATPEG HYDVPPTEGL LYETQDGDRV IVRPSGTEPK
LKAYLEVVQE VGPGDLAPAR ADAAARLADI TADLRRAIGL DGTAAGTPTS R
|
|---|
| |