| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2909 |
|---|
| Symbol | |
|---|
| ID | 7861328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3250235 |
|---|
| End bp | 3251077 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643867007 |
|---|
| Product | PHP domain protein |
|---|
| Protein accession | YP_002882916 |
|---|
| Protein GI | 229821390 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.308532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0259754 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCATCG ACCTGCACAC GCACTCGCGC GCCTCGGACG GCACCGACGC CCCCGCGGAC
CTCATGCGCG CCGCTGCCGA CGCGGGCCTC GACGTCGTCG CCCTGACCGA CCACGACACG
GCCCGCGGCT GGGGCGAGGC CGCCGACGCC GTCCCGGAGA CCGGCGTCGT CCTCGTGCGC
GGCACGGAGA TCTCGTGCTC GGCCGCGGGC ATCAGCGTGC ACCTGCTCAG CTACCTGCAC
GACCCGGACG AACCCGAGCT GCTCGCCGCC CTCGAGGCGG CGCGGGCCTC CCGCGACGCC
CGCGCGCGCC GCATGGTCGA GCTCGTCGCG CAGCGCTACC CGCTCACGTG GGACGACGTC
GCCGCACACG TGGGGCCGGA CGCCACCGTC GGGCGGCCGC ACCTGGCCGA CGCCCTGGTC
GCCGCCGGGT ACGTGGCCGA CCGCGAGGAG GCGTTCGCCG ACGTGCTGTC CTCCGCGAGC
CCGTACTACG TGCGCTACTC GGCGCCCGAC GCCGTCGCGA TGGTCGCCGT CGTCCGCCGC
GCGGGAGGGG TCCCCGTCTT CGCGCACCCG CGGGCCGACG CTCGAGGCCG CATCGTCGAC
GCGTCGGTCG TGCGGGACAT GGCGCACGCC GGGCTCGCCG GGCTCGAGGT CGACCACCGC
GACCACACCG ACGCCGCCCG CGAGACCCTG CGCGCTCTGG CCGCCGAGCT CGGGCTGCTC
GTCACGGGGT CGAGCGACTA CCACGGTGCC GGCAAGCCGA ACCGCCTCGG CGAACACACG
ACGTCGCGCG CGGTGCTCGC CGCGATCGAG GAGCAGGGGC GCCTCGCGCT GGTGCGGCCG
TGA
|
|---|
| Protein sequence | MLIDLHTHSR ASDGTDAPAD LMRAAADAGL DVVALTDHDT ARGWGEAADA VPETGVVLVR
GTEISCSAAG ISVHLLSYLH DPDEPELLAA LEAARASRDA RARRMVELVA QRYPLTWDDV
AAHVGPDATV GRPHLADALV AAGYVADREE AFADVLSSAS PYYVRYSAPD AVAMVAVVRR
AGGVPVFAHP RADARGRIVD ASVVRDMAHA GLAGLEVDHR DHTDAARETL RALAAELGLL
VTGSSDYHGA GKPNRLGEHT TSRAVLAAIE EQGRLALVRP
|
|---|
| |