| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2907 |
|---|
| Symbol | |
|---|
| ID | 7861326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3248833 |
|---|
| End bp | 3249453 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643867005 |
|---|
| Product | Sua5/YciO/YrdC/YwlC family protein |
|---|
| Protein accession | YP_002882914 |
|---|
| Protein GI | 229821388 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.169342 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0229246 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGGT ACTTCGACGT GCACCCGAAG GATCCTCAGC CGCGCGCTGT CGCACAGATC
GTCGCGATGC TCCGCGCCGA CGCGCTGATC GCGTACCCGA CCGACTCCTG CTACGCCCTC
GGGGCGCGCG TCGACAACCA CGACGCCACC GAGCGGATCC GCAGGATCCG GCAGCTGGAC
TCCCGGCATG AGTTCACGCT CGTGTGCGCG GACTTCGCGC AGCTGGGCCG CCTCGTGCAC
CTGGACAACG CCGCGTTCCG CGCCATCCGC GCCGCCACCC CGGGGCCGTA CACGTTCGTC
CTGCCGGCCA CGCCCGAGGT GCCCCGCCGG GTCGCGCAGG AGAAGAAGCG CACGGTCGGG
GTGCGCATCC CCGACCACCC CGTGGTGCGG GCCATCCTGC GCGAGCTCGA CCAGCCGCTG
CTGTCGAGCA CGCTGCTGCT CCCCGACGCC GAGGAGCCCA TGACGGAGGG TTGGCAGATC
AAGGAGCAGC TGGACACGGT CGTCGACGCG GTCGTGGACG CCGGCGACTG CGGCGTGGTG
CCCACGACCG TCGTCGACTA CTCGAGCGGT GCGCCGGAGA TCATGCGCGT CGGCGCGGGG
GACCCGAGCC GCTTCGCCTG A
|
|---|
| Protein sequence | MARYFDVHPK DPQPRAVAQI VAMLRADALI AYPTDSCYAL GARVDNHDAT ERIRRIRQLD
SRHEFTLVCA DFAQLGRLVH LDNAAFRAIR AATPGPYTFV LPATPEVPRR VAQEKKRTVG
VRIPDHPVVR AILRELDQPL LSSTLLLPDA EEPMTEGWQI KEQLDTVVDA VVDAGDCGVV
PTTVVDYSSG APEIMRVGAG DPSRFA
|
|---|
| |