| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2899 |
|---|
| Symbol | |
|---|
| ID | 7861239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3236060 |
|---|
| End bp | 3237007 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643866997 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_002882906 |
|---|
| Protein GI | 229821380 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0947619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0271253 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGAGC AGCTGCCCCT CGCCAGGTCC ACCGTCGATC GCGACGCGGC GGCCCGCGTC
CGCCCCGATC TCCTGACGGA GTCGTGGGGC GCCGCCGGGA CGCGGGTGGT GCTCGTCCAT
CGCGCGCGGC TCGCGGCCGC CGTCGACGGC CTCGACCTGA CGGCCGCCGC CGACCTCGAC
CTCGAGCCAC CGACGACGGG CACGCTGCAC TACCTCGGCC GGGACGAGAG CGGGGCGTAC
CTCTCCTGGG TGCTGCCGGA CGACGTCGCC CGCGAAGCGG ACCTCGAGGG CGTGCCGGTG
CACCCGGAGG CGAGGCTCGT CGCGGCGGCG ACGTGGCGTG GCCTGCGCGA GATCGGGGAC
ACGCTCCCGG CCCGCGACGC CGGGCTGGCC ACGGCCGCGG TCGCCCTCGC GGAGTGGCGC
GAACGGCACG TGCGCTGCCC GCGGTGCGGA GAGAGCACGC AGCTCGTGGA GGCCGGCTGG
GTGGCGCAGT GCGTGGCGGA CGGCTCCCTG CACTACCCGC GCACCGACGC CGCCGTGATC
ATGACCGTGC AGGATGCGGC CGGCCGGCTC CTCCTCGGGC ACGCGGCGCA CTGGCCGGAG
CGTCGGTTCT CGACGCTCGC CGGGTACGTG GAGCCCGGGG AGAACCTCGA GGCGGCGGTG
CGGCGCGAGG TGGCCGAGGA GGTCGGCCTC GTCGTCGATC GCGTCACCTA CCGCGGGTCG
CAGCCCTGGC CGTTCCCGGC CTCGCTCATG GTCGGGTTCG ACGCGTGGCT GGGCGACGGC
GTCCCCGACA TCGTGCAGGT GGACGGCGTC GAGCTCACCG AGGCGCGGTG GTTCACGCCG
GACGAGCTGG CCGCCGACGT CGCGGCGGGG CGCGTCCTGC TGCCGCCGCG CTCGTCGATC
GCCCTCGCCC TGATCGAGGA GTGGTTCGGC GGCCCCCTCG CGCCGTGA
|
|---|
| Protein sequence | MLEQLPLARS TVDRDAAARV RPDLLTESWG AAGTRVVLVH RARLAAAVDG LDLTAAADLD
LEPPTTGTLH YLGRDESGAY LSWVLPDDVA READLEGVPV HPEARLVAAA TWRGLREIGD
TLPARDAGLA TAAVALAEWR ERHVRCPRCG ESTQLVEAGW VAQCVADGSL HYPRTDAAVI
MTVQDAAGRL LLGHAAHWPE RRFSTLAGYV EPGENLEAAV RREVAEEVGL VVDRVTYRGS
QPWPFPASLM VGFDAWLGDG VPDIVQVDGV ELTEARWFTP DELAADVAAG RVLLPPRSSI
ALALIEEWFG GPLAP
|
|---|
| |