| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2894 |
|---|
| Symbol | |
|---|
| ID | 7860426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3229808 |
|---|
| End bp | 3230785 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643866992 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002882901 |
|---|
| Protein GI | 229821375 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00326074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0557352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC TCGTCCGTGT CGAGCTGCGT CGGCTCGTCG CTCGGCGTGC CGTGGTGCTC
GGCGTGCTGG CGGCACTCGC CGGCGTTGCC GTGGCCCTCG TGGGTGCGTG GAACTACGCG
CGTCCGCTGA CCGCCGCAGA GCAGGAGCTC GCGGAGCAGC AGTGGCAGCT GCAGGTCGAG
GACTGGGAGG AGAACGGGGA GCGCTACATC GCGGACTGCC GGGAGCAGGA GGAGGCGGAG
AGCGAGGCCA CCGGCGAGGA CGTCGACTTC GGCTGTGACT CGATCACCGC ACCCGAGCGC
GAGTGGTTCT TCCCCCAGCC GGCCACGTTC GAGGAGTTCA CGGCGAACGC CCTGGGATCC
TCGGGTCTGC TCGTCGTCGC ACTCGCCCTG TTCGTCGGGG CGACGTTCAC GGCGGCGGAG
TTCGCCACCG GCAGCATGGG GAACTGGTTG ACGTTCGAGC CACGGCGCGG CCGGGTCTAC
GCGAGCAAGC TCATCGCGGT GTCGCTCGCG GCGGTTGTCG TCTCCGCACT CCTGGTGGCG
CTGCAGGTCG GCGGCACGGC GTTCGCGTAC GCGCAGAACG GGCTCGACGT GGCGTTCACC
GCCGACCTCG CATGGACGGC CGTGCGTCTC GCCGCCCTCG GTGCGCTGTC CGCCGTCGTC
GGCGCCTCGC TCGGTGTCCT GCTCCGCCAC ACCGCAGCGG TGCTCGGCGT CGTCGCCGCC
TACGCGATCG TCGACGGCAT GACCTCGGGC ACGGTTGCGT GGCTGCAGCC CTGGAAGGTG
CTCCTGAACC TCCAGAGCTG GATCCTCGAC GGCGCGAGCT ACTGGGTGCA GGAGTGCACG
GTCTCGGAGA CCGGGACGAT GTGCGAGGGA ATCGAGCGCA CCGTGTCGCT CGGGCACAGC
GCCGCGTACC TGCTGGGGGC GACGGCGCTG ATCGCCCTGG TCGGCGTGCT CGTGTTCCGC
CGCCGCGACG TGAGTTGA
|
|---|
| Protein sequence | MSRLVRVELR RLVARRAVVL GVLAALAGVA VALVGAWNYA RPLTAAEQEL AEQQWQLQVE
DWEENGERYI ADCREQEEAE SEATGEDVDF GCDSITAPER EWFFPQPATF EEFTANALGS
SGLLVVALAL FVGATFTAAE FATGSMGNWL TFEPRRGRVY ASKLIAVSLA AVVVSALLVA
LQVGGTAFAY AQNGLDVAFT ADLAWTAVRL AALGALSAVV GASLGVLLRH TAAVLGVVAA
YAIVDGMTSG TVAWLQPWKV LLNLQSWILD GASYWVQECT VSETGTMCEG IERTVSLGHS
AAYLLGATAL IALVGVLVFR RRDVS
|
|---|
| |