Gene Bcav_2879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2879 
Symbol 
ID7860410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3214970 
End bp3216235 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content75% 
IMG OID643866976 
ProductFAD linked oxidase domain protein 
Protein accessionYP_002882886 
Protein GI229821360 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00684532 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCTGG AGCTCCTCGA CGCCGGATCC GCCTGGGCCG GTCACCGCCG TTACGCCACC 
CGCGGCCTGG TCCGCCCGGC CAGCCACGCC GAGCTCGCGG ACGTCGTCAC CAGCGGCGAA
CCCGTGCGCG TGCTCGGCTC CCGGCACTCC TTCAACGACC TCGCCGACTC GCCAGGCGTC
CTCGTGAGCC TGGACGCGCT CGTGGGCGAG CCGGTCATCG ACGAGGCACG GCGCACCGTC
ACCGTCGACG GGGCCATGCG CTACGGCGAG CTCGCCGCCT TCCTGCACGC CCACGGCTGG
GCGCTGCACG CGATGGCGTC GCTGCCGCAC ATCTCGGTCG CCGGGGCGAT CGCGACGGCG
ACCCACGGCT CGGGCGACAC GGTCACCAAC CTGGCGGGCG CCGTCGTCGG CCTGGATCTC
CTCACGGCGG ACGGCCGCCT GCACACGCTG GGCACGGGTG ACGGCGACCT CGCCGGTGCC
GTCGTCTCGC TCGGCGCCCT CGGGGTCGTG ACGAGCGTGA CGATGCGGAT CGAGCCCACG
TACGACGTCG CACAGGTCGT GTGGGAGGGC CTCGGCTGGG ACGTGCTCAC GGCCGAGTTC
GACACGCTCA GCTCGAGCGC GACGAGCGTC AGCGTCTTCA CGACGTGGCG GGACGACGTC
GCCGGCGCCG TCTGGCAGAA GCACCGCACC GACGCCGCTC CCGCACGTGA CCTCGCGGAC
CTGAGCGTGC GGCGCGCGAC CACCCCGCAC CACCCGATCC CCGGCGTCGA CGCCGCGGCG
TGCACGCAGC AGCTGGGCGT GCCCGGCCCG TGGCACGACC GGCTCCCCCA CTTCCGTCTC
GAGTTCACGC CGAGCGCCGG CGCCGAGCTG CAGAGCGAGT ACCTCCTGCC GCGGGAGCAC
CTGCCGGCGG CGATCACCGC GCTGCGGTCG CTGGCCGACG ACCTGCGCCG CCTCGTCCTC
GTGACGGAGG TCCGCACCGT GGCCGCGGAC GAGCTCTGGC TGAGCTCCGC GTACGGCCGC
GACACGGTGG GGCTGCACTT CACGTGGGTC CAGGACGTGC CGGCGGTCGA GGCGCTGCTC
CCCCGGCTCG AGGCGGCGCT CGACGGGCTC GACGCCCGTC CGCACTGGGG CAAGCTGTTC
GCCGCCGACG CCGCGACGCT CGCGGCGCGG TACTCACGGT GGGACGACGC GCGGGCGCTC
ATCCGCCGGT ACGACCCCGA CGGCGTGTTC GCCAACCCCT ACCTCCAGCG GGTCGGGCTG
CGGTGA
 
Protein sequence
MTLELLDAGS AWAGHRRYAT RGLVRPASHA ELADVVTSGE PVRVLGSRHS FNDLADSPGV 
LVSLDALVGE PVIDEARRTV TVDGAMRYGE LAAFLHAHGW ALHAMASLPH ISVAGAIATA
THGSGDTVTN LAGAVVGLDL LTADGRLHTL GTGDGDLAGA VVSLGALGVV TSVTMRIEPT
YDVAQVVWEG LGWDVLTAEF DTLSSSATSV SVFTTWRDDV AGAVWQKHRT DAAPARDLAD
LSVRRATTPH HPIPGVDAAA CTQQLGVPGP WHDRLPHFRL EFTPSAGAEL QSEYLLPREH
LPAAITALRS LADDLRRLVL VTEVRTVAAD ELWLSSAYGR DTVGLHFTWV QDVPAVEALL
PRLEAALDGL DARPHWGKLF AADAATLAAR YSRWDDARAL IRRYDPDGVF ANPYLQRVGL
R